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Job Description | P0AFF4 | Confidence | 4.74% | Date | Thu Jan 5 11:26:06 GMT 2012 |
Rank | 25 | Aligned Residues | 38 |
% Identity | 5% | Template | c1ymgA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:lens fiber major intrinsic protein; |
PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution
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Resolution | 2.24 Å |
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379 | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | W | Q | T | V | W | L | I | F | A | G | Y | S | V | V | L | A | F | A | F | M | A | M | F | K | Y | K | H | V | R | V | P | T | G | T | Q | T | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | N | H | W | V | Y | W | V | G | P | V | I | G | A | G | L | G | S | L | L | Y | D | F | L | L | F | P | R | L | K | S | V | S | E | R | L | S | I |
Template Known Secondary structure |   |
T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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