Job Description P41036 Confidence 2.45% Date Thu Jan 5 12:01:19 GMT 2012 Rank 28 Aligned Residues 141 % Identity 18% Template c3dh4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus Resolution 2.70 Å

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		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	G	G	F	L	G	D	W	L	G	T	R	K	A	Y	V	C	S	L	L	A	S	Q	L	L	I	I	P	V	F	A	I	G	G	A	N	V	W	V	L	G	L	L	L	F	F	Q	Q	M	L	G	Q	G	I	A	G	I	L	P	K	L	I	G	G	Y	F	D	T	D	Q	R	A	A	G	L	G	F	T	Y
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.
Template Sequence		I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	C	L	I	A	P	M	L	G	G	I	G	Q	A	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	F	W	K	K	T	.	.	.	.	.	.	.	.	T
Template Known Secondary structure		T							S		S		S	S																					G	G	G	G	G	G		S											T	T	T															T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.									.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430				.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		N	V	G	A	L	G	G	A	L	A	P	I	I	G	A	L	I	A	Q	R	L	D	.	.	.	L	G	T	A	L	A	S	L	S	F	S	L	T	F	V	V	I	L	L	I	G	L	D	M	P	S	R	V	Q	R	W	L	R	P	E	A	L	R	T	H	D	A	I	D	G	K	P
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	M	P	L	S	M	P	F	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S	T	S	I	N	D	D	D	P	K	G	I	S	V	T	S	S	M	F	V	T	D	R	S	F
Template Known Secondary structure																					T	S	S	S																									T	T		S	S	S	S		T	T							S						T	T
Template Predicted Secondary structure
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions