Job Description P08400 Confidence 96.83% Date Thu Jan 5 11:01:28 GMT 2012 Rank 111 Aligned Residues 85 % Identity 11% Template d1jnua_ SCOP info Profilin-like PYP-like sensor domain (PAS domain) Flavin-binding PAS domain Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	V	L	T	T	E	E	.	.	.	G	G	I	F	W	C	N	G	L	A	Q	Q	I	L	G	L	R	W	P	E	D	N	G	Q	N	I	L	N	L	L	R	Y	P	E	F	T	Q	Y	L	K	.	.	.	.	.	.	.	.	.	.	T	R	D	F	S	R	P	L	N	L	V	L	N	T	G	R	H	L	E
Query Conservation										.	.	.																																									.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	V	I	T	D	P	R	L	P	D	N	P	I	I	F	A	S	D	R	F	L	E	L	T	E	Y	T	R	E	E	V	L	G	N	N	C	R	F	L	Q	G	R	G	T	D	R	K	A	V	Q	L	I	R	D	A	V	K	E	Q	R	D	V	T	V	Q	V	L	N	Y	T	K	G	G	R	A	F	W	N	L
Template Known Secondary structure								T	T	S	T	T															T							T	T	S		G	G	G	G			T	T	S															T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		I	R	V	M	P	Y	T	H	K	.	.	.	.	.	Q	L	L	M	V	A	R	D	V
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.
Template Conservation
Template Sequence		F	H	L	Q	V	M	R	D	E	N	G	D	V	Q	Y	F	I	G	V	Q	Q	E	M
Template Known Secondary structure									T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions