Job Description P08400 Confidence 98.94% Date Thu Jan 5 11:01:28 GMT 2012 Rank 34 Aligned Residues 97 % Identity 31% Template c3na3A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:dna mismatch repair protein mlh1; PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens Resolution 2.50 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	S	A	I	S	N	L	V	Y	N	A	V	N	H	T	P	E	G	T	H	I	T	V	R	W	Q	R	V	P	H	G	A	E	F	S	V	E	D	N	G	P	G	I	A	P	E	H	I	P	R	L	T	E	R	F	Y	R	V	D	K	A	R	S	R	Q	T	G	G	S	G	L	G	L	A	I	V	K	H	A
Query Conservation
Alig confidence																	.	.																.																															.	.	.
Template Conservation																	.	.																.																															.	.	.
Template Sequence		P	A	N	A	I	K	E	M	I	E	N	C	L	D	A	.	.	K	S	T	S	I	Q	V	I	V	K	E	G	G	L	K	.	L	I	Q	I	Q	D	N	G	T	G	I	R	K	E	D	L	D	I	V	C	E	R	F	T	T	S	K	L	Q	S	.	.	.	F	G	F	R	G	E	A	L	A	S	I	S	H	V
Template Known Secondary structure																T	.	.	T		S								G	G	G	T	S	.								S					G	G	G	G	G	T	T	T	S	T	T			S	S				.	.	.				T	T									S
Template Predicted Secondary structure																	.	.																.																															.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.																										.	.	.	.	.	.	.	420						.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		V	N	H	H	E	S	R	L	N	I	E	S	T	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	T	R	F	S	F	V	.	.	.	.	.	I	P	E	R	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	A	H	V	T	I	T	T	K	T	A	D	G	K	C	A	Y	R	A	S	Y	S	D	G	K	L	K	A	P	P	K	P	C	A	G	N	Q	G	T	Q	I	T	V	E	D	L	F	Y	N	I	A	T	R	R
Template Known Secondary structure		.	.	.	.	.	S									T	T		S	S								T	T			S	S									S								S	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions