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Job DescriptionP08400
Confidence96.90%DateThu Jan 5 11:01:28 GMT 2012
Rank110Aligned Residues88
% Identity17%Templatec3lnuA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:topoisomerase iv subunit b; PDBTitle: crystal structure of pare subunit
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   318.320.........330... ......340.........350.........360.........370.........380.........390.....
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Query Sequence  LRSAISNLVYNAVNHT. . PEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVK
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Template Sequence  PNHLAQEVIDNSVDEALAGHAKQIEVTLYKDGS. . . CEVSDDGRGMPVD. . . . . . . . IHPEEKIPGVELILTRLGVSV. .
Template Known Secondary structure  TTTS


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   76...80.........90.........100........ .110.........120. ........130.........140..
 
   396...400.........410.........420.
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Query Sequence  HAVNHHESRLNIESTVGKGTRFSFVI
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Template Sequence  . . VNALSTKVELFIKRE. GSEHRMEF
Template Known Secondary structure  ..TT.T
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   163......170....... ..180.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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