Job Description P08400 Confidence 97.90% Date Thu Jan 5 11:01:28 GMT 2012 Rank 62 Aligned Residues 111 % Identity 15% Template c3kx0X_ PDB info PDB header:signaling protein Chain: X: PDB Molecule:uncharacterized protein rv1364c/mt1410; PDBTitle: crystal structure of the pas domain of rv1364c Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		R	R	E	L	G	N	L	I	K	R	F	R	S	G	A	E	S	L	P	D	A	V	V	L	T	T	.	E	E	G	G	I	F	W	C	N	G	L	A	Q	Q	I	L	G	L	R	W	P	E	D	N	G	Q	N	I	L	N	L	L	R	Y	P	E	F	T	Q	Y	L	K	T	R	D	F	S	R	P	L	N	L	V
Query Conservation																												.
Alig confidence																												.																			.	.
Template Conservation																																															.	.
Template Sequence		W	D	K	T	V	G	A	A	E	D	V	R	R	I	F	E	H	I	P	A	I	L	V	G	L	E	G	P	D	H	R	F	V	A	V	N	A	A	Y	R	G	F	S	P	L	.	.	L	D	T	V	G	Q	P	A	R	E	V	Y	P	E	L	E	G	Q	Q	I	Y	E	X	L	D	R	V	Y	Q	T	G	E	P
Template Known Secondary structure						T														S	S							T	T	T	T																.	.		S		T	T	S	B						T	T	S		S	S	S	S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		169	170	.	.	.													.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	T	G	R	.	.	.	.	.	.	.	.	.	.	.	.	H	L	E	I	R	V	M	P	Y	T	H	K	Q	L	L	M	V	A	R	D	V	T	Q	M	H	Q	L	E	G
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	G	S	E	W	R	L	Q	E	E	R	Y	F	D	F	V	V	T	P	R	R	R	A	D	G	S	I	E	G	V	Q	L	I	V	D	D	V	T	S	R	V	R	A	R	Q
Template Known Secondary structure																									T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions