Job Description P08400 Confidence 99.84% Date Thu Jan 5 11:01:28 GMT 2012 Rank 19 Aligned Residues 154 % Identity 27% Template c3jz3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:sensor protein qsec; PDBTitle: structure of the cytoplasmic segment of histidine kinase qsec Resolution 2.50 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																										.													.
Query SS confidence																																																										.													.
Query Sequence		A	V	R	E	K	A	L	H	T	M	R	E	Q	T	Q	R	M	E	G	L	V	K	Q	L	L	T	L	S	K	I	E	A	A	P	T	H	L	L	N	E	K	V	D	V	P	M	M	L	R	V	V	E	R	E	A	Q	.	T	L	S	Q	K	K	Q	T	F	T	F	E	.	I	D	N	G	L	K	V	S	G	N
Query Conservation																																																										.													.
Alig confidence																																																										.													.
Template Conservation
Template Sequence		S	D	D	D	P	Q	L	L	Q	L	H	S	G	I	D	R	A	T	R	L	V	D	Q	L	L	T	L	S	R	L	D	S	L	D	N	L	Q	D	V	A	E	I	P	L	E	D	L	L	Q	S	S	V	X	D	I	Y	H	T	A	Q	Q	A	K	I	D	V	R	L	T	L	N	A	H	S	I	K	R	T	G	Q
Template Known Secondary structure																													T	T				S	T	T		T	T																								T	T								S			S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	Q	L	R	S	A	I	S	N	L	V	Y	N	A	V	N	H	T	P	E	G	T	H	I	T	V	R	W	Q	R	V	P	H	G	A	E	F	S	V	E	D	N	G	P	G	I	A	P	E	H	I	P	R	L	T	E	R	F	Y	R	V	D	K	A	R	S	R	Q	T	G	G	S	G	L	G	L	A	I	V
Query Conservation
Alig confidence																																			.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	L	L	S	L	L	V	R	N	L	L	D	N	A	V	R	Y	S	P	Q	G	S	V	V	D	V	T	L	N	A	D	N	.	.	.	.	F	I	V	R	D	N	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	S	I	V
Template Known Secondary structure																			S			T	T									S	S		.	.	.	.						S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.																														.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	A	V	N	H	H	E	S	R	L	N	I	E	S	T	V	G	K	G	T	R	F	S	F	V	I	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	I	A	K	L	H	G	X	N	V	E	F	G	N	A	E	Q	G	G	F	E	A	K	V	S	W	L	E
Template Known Secondary structure								T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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