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Job DescriptionP08400
Confidence98.35%DateThu Jan 5 11:01:28 GMT 2012
Rank43Aligned Residues96
% Identity22%Templatec3h4lB_
PDB info PDB header:dna binding protein, protein bindingChain: B: PDB Molecule:dna mismatch repair protein pms1; PDBTitle: crystal structure of n terminal domain of a dna repair protein
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   318.320.........330.........340.........350.........360.........370.........380... ......390.
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Query Sequence  LRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQ. . . . . . TGGSGLGL
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Template Sequence  LTTAVKELVDNSIDAN. . ANQIEIIFKDYGLE. SIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEAL
Template Known Secondary structure  TT..
SGGGTS.
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   55....60.........70 .........80.... .....90.........100.........110.........120.........130.
 
   392.......400.........410.........420.
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Query Sequence  AIVKHAVNHHESRLNIESTVGKGTRFSFVI
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Template Sequence  SSLCGI. . . . . AKLSVITTTSPPKADKLEY
Template Known Secondary structure  S.....SSSTT
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   132..... ..140.........150......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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