Job Description P08400 Confidence 97.38% Date Thu Jan 5 11:01:28 GMT 2012 Rank 92 Aligned Residues 94 % Identity 9% Template c3f1oB_ PDB info PDB header:transcription Chain: B: PDB Molecule:aryl hydrocarbon receptor nuclear translocator; PDBTitle: crystal structure of the high affinity heterodimer of hif22 alpha and arnt c-terminal pas domains, with an internally-3 bound artificial ligand Resolution 1.60 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.												160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	S	L	P	D	A	V	V	L	T	T	E	E	G	G	I	F	W	C	N	G	L	A	Q	Q	I	L	G	L	R	W	P	E	D	N	G	Q	N	I	L	N	L	L	R	Y	P	E	F	T	Q	Y	L	K	T	R	.	.	.	.	.	.	.	.	.	.	.	D	F	S	R	P	L	N	L	V	L	N	T	G
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	C	Q	P	T	R	F	I	S	R	H	N	I	E	G	I	F	T	F	V	D	H	R	C	V	A	T	V	G	Y	Q	P	Q	E	L	L	G	K	N	I	V	E	F	C	H	P	E	D	Q	Q	L	L	R	D	S	F	Q	Q	V	V	K	L	K	G	Q	V	L	S	V	M	F	R	F	R	S	K	N	Q	E	W
Template Known Secondary structure														T	T		B						T	T						S			G	G	G	T	T	T	S	B	G	G	G	G	B		T	T	T												T	T	S	T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		R	H	L	E	I	R	V	M	P	Y	T	H	K	Q	.	.	.	.	.	.	L	L	M	V	A	R	D	V	T	Q	M
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		L	W	M	R	T	S	S	F	T	F	Q	N	P	Y	S	D	E	I	E	Y	I	I	C	T	N	T	N	V	K	N	S
Template Known Secondary structure														T	T	S															S
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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