Job Description P08400 Confidence 96.57% Date Thu Jan 5 11:01:28 GMT 2012 Rank 113 Aligned Residues 92 % Identity 9% Template c2oolA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the chromophore-binding domain of an unusual2 bacteriophytochrome rpbphp3 from r. palustris Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		V	V	L	T	T	E	E	G	G	I	F	W	C	N	G	L	A	Q	Q	I	L	G	L	R	W	P	E	D	N	G	Q	N	I	L	N	L	L	R	Y	P	E	F	T	Q	Y	L	K	T	R	D	F	.	.	.	S	R	P	L	N	L	V	L	N	T	G	R	H	L	E	I	R	V	M	P	Y	T	H	K	Q	L
Query Conservation																																																					.	.	.
Alig confidence																																																					.	.	.
Template Conservation
Template Sequence		F	V	V	S	E	T	D	L	R	I	A	S	V	S	A	N	V	E	D	L	L	R	Q	P	P	A	S	L	L	N	V	P	I	A	H	Y	L	T	A	A	S	A	A	R	L	T	H	A	L	H	G	A	I	N	P	I	R	L	D	V	V	T	P	D	G	E	R	A	F	N	G	I	L	H	R	H	D	S	I	V
Template Known Secondary structure						T	T	T		B						T	T						S	S		G	G	G	G	T	T		B	G	G	G	G	B																		S								T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	V	A	R	D	V	T	Q	M	H	Q	L	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	E	L	E	P	R	D	E	S	R	Y	T	N	E
Template Known Secondary structure												S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions