Job Description P08400 Confidence 96.77% Date Thu Jan 5 11:01:28 GMT 2012 Rank 112 Aligned Residues 75 % Identity 11% Template c2kdkA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:aryl hydrocarbon receptor nuclear translocator-like protein PDBTitle: structure of human circadian clock protein bmal2 c-terminal pas domain Resolution UNK

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	D	A	V	V	L	T	T	E	E	G	G	I	F	W	C	N	G	L	A	Q	Q	I	L	G	L	R	W	P	E	D	N	G	Q	N	I	L	N	L	L	R	Y	P	E	F	T	Q	Y	L	K	T	R	D	F	S	R	P	L	N	L	V	L	N	T	G	R	H	L	E	I	R	V	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	E	F	I	T	R	F	A	V	N	G	K	F	V	Y	V	D	Q	R	A	T	A	I	L	G	Y	L	P	Q	E	L	L	G	T	S	C	Y	E	Y	F	H	Q	D	D	H	N	N	L	T	D	K	H	K	A	V	L	Q	S	K	E	K	I	L	T	D	S	Y	K	F	R	A	K	D	G
Template Known Secondary structure		S	S								T	T	S	B						T						T				T	T	T	S	B	T	S	B	T	T	T	T	B		S	S	S													T	S	S	S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions