Job Description P08400 Confidence 97.14% Date Thu Jan 5 11:01:28 GMT 2012 Rank 103 Aligned Residues 100 % Identity 17% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.									.	370	.	.	.	.	.	.	.	.					.	380	.	.	.	.
Predicted Secondary structure																					.																																	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence																					.																																	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		L	R	S	A	I	S	N	L	V	Y	N	A	V	N	H	T	P	E	G	.	T	H	I	T	V	R	W	Q	R	V	P	H	G	A	E	F	S	V	E	D	N	G	P	G	I	A	P	E	H	I	P	R	.	.	.	.	.	.	.	.	L	T	E	R	F	Y	R	V	D	K	.	.	.	.	A	R	S	R	Q	T
Query Conservation																					.																																	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence																					.																																	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation
Template Sequence		L	Y	K	I	F	D	E	I	L	V	N	A	A	D	N	K	Q	R	D	P	K	M	S	C	I	R	V	T	I	D	P	E	N	N	L	I	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	E	K	M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	Y	D	D	D	E	K	K	V	T	G
Template Known Secondary structure																G	G	G	T		T	T										T	T	T	T								S	S					S			T	T	T	T										S	S	S			S				G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		G	G	S	G	L	G	L	A	I	V	K	H	A	V	N	H	H	E	S	R	L	N	I	E	S	T	.	V	G	K	G	T	R	F	S	F	V	I
Query Conservation																												.
Alig confidence										.	.	.	.															.
Template Conservation										.	.	.	.
Template Sequence		G	R	N	G	Y	G	A	K	.	.	.	.	L	C	N	I	F	S	T	K	F	T	V	E	T	A	S	R	E	Y	K	K	M	F	K	Q	T	W
Template Known Secondary structure				S	S					.	.	.	.					T											G	G	G	T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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