Job Description P08400 Confidence 97.85% Date Thu Jan 5 11:01:28 GMT 2012 Rank 67 Aligned Residues 83 % Identity 28% Template c1ea6A_ PDB info PDB header:dna repair Chain: A: PDB Molecule:pms1 protein homolog 2; PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp Resolution 2.7 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	S	A	I	S	N	L	V	Y	N	A	V	N	H	T	P	E	G	T	H	I	T	V	R	W	Q	R	V	P	H	G	A	E	F	S	V	E	D	N	G	P	G	I	A	P	E	H	I	P	R	L	T	E	R	F	Y	R	V	D	K	A	R	S	R	Q	T	G	G	S	G	L	G	L	A	I	V	K	H	A
Query Conservation
Alig confidence																										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	T	A	V	K	E	L	V	E	N	S	L	D	A	G	A	T	N	I	D	L	K	L	.	.	.	K	D	Y	G	V	D	L	I	E	V	S	D	N	G	C	G	V	E	E	E	N	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	L	E	A	L	S	S	L	C	A	L
Template Known Secondary structure																T	T		S							.	.	.		T	T	T	T	S								S					T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																		.	.	.	.	.	.	.	.	90	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.																										.	.	.	.	.	.	.	420						.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		V	N	H	H	E	S	R	L	N	I	E	S	T	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	T	R	F	S	F	V	.	.	.	.	.	I	P	E	R	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	D	V	T	I	S	T	C	H	A	S	A	K	V	G	T	R	L	M	F	D	H	N	G	K	I	I	Q	K	T	P	Y	P	R	P	R	G	T	T	V	S	V	Q	Q	L	F	S	T	L	P	V	R	H
Template Known Secondary structure		.	.	.	.	.	S									T	T		S	S								T	T	S												S								S	T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions