 |
| Job Description | P36683 | | Confidence | 21.16% | Date | Thu Jan 5 11:53:49 GMT 2012 |
| Rank | 33 | Aligned Residues | 38 |
| % Identity | 18% | Template | d1uw4a_ |
| SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Smg-4/UPF3
|
| Resolution | 1.95 |
|
|   |   |
825 | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | Y | Q | T | Y | V | A | Q | V | D | K | T | A | V | D | T | Y | . |
. |
. |
. |
. |
R | Y | L | N | F | N | Q | L | S | Q | Y | T | E | K | A | D | G | V | I | F | Q |
| Query Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |
|   |   |
|
|   |
|   |
|   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |
|   |
| Template Sequence |   |
D | Y | F | E | F | F | S | N | D | T | S | L | Y | P | H | M | Y | A | R | A | Y | I | N | F | K | N | Q | E | D | I | I | L | F | R | D | R | F | D | G | Y | V | F | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  | S |
|
| S | S | T | T |
|
|
|  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|