Job Description P36683 Confidence 99.86% Date Thu Jan 5 11:53:49 GMT 2012 Rank 10 Aligned Residues 159 % Identity 20% Template c2pkpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:homoaconitase small subunit; PDBTitle: crystal structure of 3-isopropylmalate dehydratase (leud)2 from methhanocaldococcus jannaschii dsm2661 (mj1271) Resolution 2.10 Å

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	T	V	F	K	V	T	G	E	T	N	T	D	D	L	S	P	A	P	D	A	W	S	R	P	D	I	P	L	H	A	L	A	M	L	K	N	A	R	E	G	I	E	P	D	Q	P	G	V	V	G	P	I	K	Q	I	E	A	L	Q	Q	K	G	F	P	L	A	Y	V	G	D	V	V	G	T	G	S	S
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	G	R	A	H	K	F	G	D	D	V	D	T	D	A	I	I	P	G	P	Y	L	R	T	T	D	P	Y	E	L	A	S	H	C	M	A	G	I	D	E	N	F	P	K	K	V	K	E	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	V	A	G	E	N	F	G	C	G	S	S
Template Known Secondary structure											S			B					S		G	G	G	G	S									T	T	T	T	T	T	T		T	T							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	B	T	B	S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																	.	.	.	.	.	.	60	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	S	A	T	N	S	V	L	W	F	M	G	D	D	I	P	H	V	P	N	K	R	G	G	G	L	C	L	G	G	K	I	A	P	I	F	F	N	T	M	E	D	A	G	A	L	P	I	E	V	D	V	S	N	L	N	M	G	D	V	I	D	V	Y	P	Y	K	G	E	V	R	N	H	E	T	G	E	L	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template Sequence		R	E	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	V	I	A	I	K	Y	C	G	I	K	A	V	I	A	K	S	F	A	R	I	F	Y	R	N	A	I	N	V	G	L	I	P	I	I	A	N	T	D	E	I	K	D	G	D	I	V	E	I	D	L	D	K	E	E	I	V	I	T	N	K	.	N	K	T
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.						T	T	T							S		B												T								G	G	G			T	T							T	T	T	T					G	G	G	.	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template SS confidence
		67	.	.	70													.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	F	E	L	K	T	D	V	L	I	D	E	V	R	A	G	G	R	I	P	L	I	I	G	R	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	C	E	T	P	K	G	L	E	R	E	I	L	A	A	G	G	L	V	N	Y	L	K	K	R	K	L
Template Known Secondary structure					B												T	T	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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