 |
| Job Description | P36683 | | Confidence | 24.85% | Date | Thu Jan 5 11:53:49 GMT 2012 |
| Rank | 28 | Aligned Residues | 25 |
| % Identity | 28% | Template | c2gefA_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:protease vp4; |
PDBTitle: crystal structure of a novel viral protease with a2 serine/lysine catalytic dyad mechanism
|
| Resolution | 2.20 Å |
|
| | |
261 | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|  | | | |  |
|
|  | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | P | H | V | P | N | K | R | G | G | G | L | C | L | G | G | K | I | A | P | I | F | F | N | T |
| Query Conservation | |
|
| | | | | | | | | | |
| | | | | |
| |
|
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
|
| | |
|
|
|
| |
| | | |
|
| |
|
| | | |
|
| Template Sequence | |
L | P | F | V | P | K | A | A | Y | T | G | C | L | S | G | T | N | V | Q | P | V | Q | F | G | N |
| Template Known Secondary structure | |
| S | S |
|
| S | S | | | |
| | | | T | T | | | |
| B | S |
| | |
| Template Predicted Secondary structure | |
|
|
|
|
|
| | | | | | | |
|
|
| | | | | | |
|
| |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
703 | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
