Job Description P36683 Confidence 19.33% Date Thu Jan 5 11:53:49 GMT 2012 Rank 37 Aligned Residues 120 % Identity 23% Template c1dgsB_ PDB info PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis Resolution 2.90 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Q	V	M	Q	S	W	A	D	A	E	W	F	L	N	R	P	A	L	A	E	K	L	T	V	T	V	F	K	V	T	G	E	T	N	T	D	D	L	S	P	A	P	D	A	W	S	R	P	D	I	P	L	H	A	L	A	M	L	K	N	A	R	E	G	I	E	P	D	Q	P	G	V	V	G	P	I	K	Q
Query Conservation
Alig confidence											.	.																					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	G	V	E	E	V	Y	R	.	.	R	G	L	A	Q	R	H	A	L	P	F	E	A	D	G	V	V	L	K	L	.	.	.	.	.	.	D	D	L	T	L	W	G	E	L	G	Y	T	A	R	A	P	R	F	A	L	A	Y	K	F	P	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											.	.					T	G	G	G	S	S	S										.	.	.	.	.	.	S	B	T	T					S		B		S	S	S	B	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.																					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2261	.	.	.	.	.	.	.	.			2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.							2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																									.																			.	.
Query SS confidence																																																									.																			.	.
Query Sequence		I	E	A	L	Q	Q	K	G	F	P	L	A	Y	V	G	D	V	V	G	T	G	S	S	R	K	S	A	T	N	S	V	L	W	F	M	G	D	D	I	P	H	V	P	N	K	R	G	G	G	L	C	L	G	G	K	.	I	A	P	I	F	F	N	T	M	E	D	A	G	A	L	P	I	E	.	.	V	D	V	S
Query Conservation																																																									.																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.																			.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	T	R	L	L	D	V	V	F	Q	V	G	R	T	G	R	V	T	P	V	G	V	L	E	P	V	F	I	E	G	S	E	V	S	R	V	T	L	H	N	E	S	Y	I	E	E	L	D	I	R	I	G	D	W	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T		B												S	S	S	S									S							T	T		B	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									2318	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.
		300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	N	M	G	D	V	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	K	A	G	G	V	I	P
Template Known Secondary structure						T	T	T
Template Predicted Secondary structure
Template SS confidence
		2375	.	.	.	.	2380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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