Return to main results Retrieve Phyre Job Id

Job DescriptionP75991
Confidence2.37%DateThu Jan 5 12:17:03 GMT 2012
Rank56Aligned Residues23
% Identity17%Templatec2vi6F_
PDB info PDB header:transcriptionChain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20........
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  VTLDSAGAITRYFAKANLHTQQE
Query Conservation    

   


 

 
   




Alig confidence 






















Template Conservation 

  
   

  
    


   
Template Sequence  FSQAQLCALKDRFQKQKYLSLQQ
Template Known Secondary structure 


S


Template Predicted Secondary structure 






Template SS confidence 






















   8.10.........20.........30
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions