Job Description P52697 Confidence 99.30% Date Thu Jan 5 12:06:01 GMT 2012 Rank 115 Aligned Residues 218 % Identity 11% Template d1ospo_ SCOP info open-sided beta-meander Outer surface protein Outer surface protein Resolution 1.95

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																								.																																																							.	.	.
Template Conservation																								.
Template Sequence		V	D	L	P	G	E	M	K	V	L	V	S	K	E	K	N	K	D	G	K	Y	D	.	L	I	A	T	V	D	K	L	E	L	K	G	T	S	D	K	N	N	G	S	G	V	L	E	G	V	K	A	D	K	C	K	V	K	L	T	I	S	D	D	L	G	Q	T	T	L	E	V	F	K	E	D	G	K	T	L	V
Template Known Secondary structure					G	G	G							S	S			T	T	S				.						T	T								S	S	S	S	S									T	T	S									T	T	S										T	T	S	S	S
Template Predicted Secondary structure																								.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
			106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.																																						.	.
Query SS confidence		.																																						.	.
Query Sequence		.	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	.	.	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V
Query Conservation		.																																						.	.
Alig confidence		.																	.	.																				.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	K	V	T	S	K	D	K	S	S	T	E	E	K	F	N	.	.	E	K	G	E	V	S	E	K	I	I	T	R	A	D	G	T	R	L	E	Y	T	G	I	K	S	D	G	S	G	K	A	K	E	V	L	K	G	Y	V	L	E	G	T	L	T	A	E	K	T	T	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	S									.	.	T	T	S										T	T	S							S			T	T	S									S	S									S	S				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	V	K	E	G	T	V	T	L	S	K	N	.	I	S	K	S	G	E	V	S	V	E	L	N	D	T	D	S	S	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T							.			T	T														T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
																																																		178	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	.	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H
Query Conservation																																.
Alig confidence											.	.	.																			.
Template Conservation											.	.	.
Template Sequence		A	T	K	K	T	A	A	W	N	.	.	.	S	G	T	S	T	L	T	I	T	V	N	S	K	K	T	K	D	L	V	F	T	K	E	N	T	I	T	V	Q	Q	Y	D	S	N	G	T	K	L	E
Template Known Secondary structure		T	T								.	.	.	G	G	G	T							T	T										T	T	S							B		T	T	S	S	S	B
Template Predicted Secondary structure											.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions