Job Description P52697 Confidence 98.54% Date Thu Jan 5 12:06:01 GMT 2012 Rank 145 Aligned Residues 309 % Identity 8% Template d1mdah_ SCOP info 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Resolution 2.50

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		3	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure											.	.																																											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																																											.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	V	Y	I	A	S	P	E	.	.	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	.	.	.	.	.	.	.	.	.	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A
Query Conservation											.	.																																											.	.	.	.	.	.	.	.	.
Alig confidence											.	.																				.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		R	R	S	H	I	T	L	P	A	Y	F	A	G	T	T	E	N	W	V	S	C	A	G	C	G	V	T	L	G	H	.	.	S	L	G	A	F	L	S	L	A	V	A	G	H	S	G	S	D	F	A	L	A	S	T	S	F	A	R	S	A	K	G	K	R	T	D	Y	V	E	V	F	D	P	V	T	F	L	P	I
Template Known Secondary structure		T								T	T	T		S	S								T	T	T	T						.	.					T	T							T	T	S	S										T	T	T	T	S	S	S										T	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		L	T	F	A	A	E	S	.	.	.	.	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																																													.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.
Template Sequence		A	D	I	E	L	P	D	A	P	R	F	S	V	G	P	R	V	H	I	I	G	N	C	A	S	S	A	C	L	L	F	F	L	F	G	S	S	A	A	A	G	L	S	V	P	G	A	S	D	D	Q	L	T	K	S	.	.	.	.	.	.	A	S	C	F	H	I	H	P	G	A	A	A	T	H	Y	L	G	S	C
Template Known Secondary structure							T	T	S		S				S			T	T	S					T	T	S	S								S	S	S								T	T	T									.	.	.	.	.	.	S	S									T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	.	.	D	M	M	P	E	N	F
Query Conservation																																																																									.	.
Alig confidence																																																		.	.	.																					.	.
Template Conservation																																																		.	.	.
Template Sequence		P	A	S	L	A	A	S	D	L	A	A	A	P	A	A	A	G	I	V	G	A	Q	C	T	G	A	Q	N	C	S	S	Q	A	A	Q	A	N	Y	P	G	M	L	V	W	A	V	A	S	.	.	.	S	I	L	Q	G	D	I	P	A	A	G	A	T	M	K	A	A	I	D	G	N	E	S	G	R	K	A	D	N
Template Known Secondary structure		T	T	S								S	S											S		T	T	S		B		S						T	T	T	T						B	S	S	.	.	.									S	S										S	S		T					T	T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.							.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																																											.
Query SS confidence																							.	.	.	.	.	.																																											.
Query Sequence		S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	.	.	.	.	.	.	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	.	L	I	A	A	G	Q	K	S	H	H
Query Conservation																							.	.	.	.	.	.																																											.
Alig confidence																							.	.	.	.	.	.																		.	.																								.
Template Conservation																																														.	.
Template Sequence		F	R	S	A	G	F	Q	M	V	A	K	L	K	N	T	D	G	I	M	I	L	T	V	E	H	S	R	S	C	L	A	A	A	E	N	T	S	S	V	T	A	S	V	G	.	.	Q	T	S	G	P	I	S	N	G	H	D	S	D	A	I	I	A	A	Q	D	G	A	S	D	N	Y	A	N	S	A	G	T	E	V
Template Known Secondary structure						S	S	S						T	T	T	T										S	S		T	T	S										S	S	S		.	.																				S	S	S								T	T	T	T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P	M	W	V	V	V
Query Conservation
Alig confidence						.	.						.	.
Template Conservation						.	.						.	.
Template Sequence		L	D	I	Y	.	.	D	A	A	S	D	.	.	Q	D	Q	S	S	V	E	L	D	K	G	P	E	S	L	S	V
Template Known Secondary structure						.	.		S	S	S		.	.										S
Template Predicted Secondary structure						.	.						.	.
Template SS confidence
		339	340	.	.			.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions