Phyre 2 alignment of P52697 with d1erja

Job Description P52697
Confidence 99.70% Date Thu Jan 5 12:06:01 GMT 2012

Rank 58 Aligned Residues 287

% Identity 9% Template d1erja_

SCOP info 7-bladed beta-propeller WD40 repeat-like WD40-repeat

Resolution 2.30

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	.	.	.	.	.	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.																													.					.													.	.	.
Template Conservation																																																			.					.													.	.	.
Template Sequence	V	P	D	A	L	K	K	Q	T	N	D	Y	Y	I	L	Y	N	P	A	L	P	R	E	I	D	V	E	L	H	K	S	L	D	H	T	S	V	V	C	C	V	K	F	S	N	D	G	E	Y	L	.	A	T	G	C	.	N	K	T	T	Q	V	Y	R	V	S	D	G	.	.	.	S	L	V	A	R	L	S	D	S
Template Known Secondary structure	S		T	T	S					S	S							T	T	S															S	S									T	T	S	S			.					.	B	S							T	T	T		.	.	.
Template Predicted Secondary structure																																																			.					.													.	.	.
Template SS confidence
	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.

	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence	S	D	L	Y	I	R	S	V	C	F	S	P	D	G	K	F	L	A	T	G	A	E	D	R	L	I	R	I	W	D	.	.	.	I	E	N	R	K	I	V	M	I	L	Q	G	H	E	Q	D	I	Y	S	L	D	Y	F	P	S	G	D	K	L	V	S	G	S	G	D	R	T	V	R	I	W	D	L	R	T	G	Q
Template Known Secondary structure				B								T	T	S	S							T	T	S							.	.	.	T	T	T	T										S	S									T	T	S	S							T	T	S							T	T	T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
	442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.				.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.

	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	C	S	L	T	L	S	I	E	D	G	V	T	T	V	A	V	S	P	G	D	G	K	Y	I	A	A	G	S	L	D	R	A	V	R	V	W	D	S	E	T	G	F	L	V	E	R	L	D	T	G	H	K	D	S	V	Y	S	V	V	F	T	R	D	G	Q	S	V	V	S	G	S	L	D	R	S	V	K	L	W	N
Template Known Secondary structure								S	S									S	T	T									T	T	S							T	T	T												S	S									T	T	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
	519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.

	218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.							.	.	.	.	.	.	290	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	.	.	.	.	.	.	H	S	G	K	Y	L	I	A
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																											.																												.	.	.										.	.	.	.	.	.
Template Conservation																											.																												.	.	.
Template Sequence	L	T	C	E	V	T	Y	I	G	H	K	D	F	V	L	S	V	A	T	T	Q	N	D	E	Y	I	.	L	S	G	S	K	D	R	G	V	L	F	W	D	K	K	S	G	N	P	L	L	M	L	Q	G	H	R	.	.	.	N	S	V	I	S	V	A	V	A	N	G	S	S	L	G	P	E	Y	N	V	F	A	T
Template Known Secondary structure											S	S									G	G	G				.					T	T	S							T	T	T											S	.	.	.	S									S	S		T	T		T	T
Template Predicted Secondary structure																											.																												.	.	.
Template SS confidence
	605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.				.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680

	292	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence	G	S	G	D	.	C	K	A	R	I	W	K	Y	K
Template Known Secondary structure			T	T	.	S
Template Predicted Secondary structure					.
Template SS confidence
	696	.	.	.		700	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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