Job Description P52697 Confidence 95.34% Date Thu Jan 5 12:06:01 GMT 2012 Rank 168 Aligned Residues 142 % Identity 10% Template c3q6kA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:43.2 kda salivary protein; PDBTitle: salivary protein from lutzomyia longipalpis Resolution 2.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	.	.	.	.	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		V	Y	I	T	N	F	L	R	G	A	L	F	I	Y	D	H	K	K	Q	D	S	W	N	V	T	H	P	T	F	K	A	E	R	P	T	K	F	D	Y	G	G	K	E	Y	E	F	K	A	G	I	F	G	I	T	L	G	D	R	D	S	E	G	N	R	P	A	Y	Y	L	A	G	S	A	I	K	V	Y	S	V	N
Template Known Secondary structure							T	T	T	T							T	T	T	T								G	G	G	S			S							T	T																			T	T	S									S	S		S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		65						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.																																														.	.	.	.
Query SS confidence			.	.	.	.	.																																														.	.	.	.
Query Sequence		I	.	.	.	.	.	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	.	.	.	.	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S
Query Conservation			.	.	.	.	.																																														.	.	.	.
Alig confidence			.	.	.	.	.																																														.	.	.	.
Template Conservation
Template Sequence		T	K	E	L	K	Q	K	G	G	K	L	N	P	E	L	L	G	N	R	G	K	Y	N	D	A	I	A	L	A	Y	D	P	K	T	K	V	I	F	F	A	E	A	N	T	K	Q	V	S	C	W	N	T	Q	K	M	P	L	R	M	K	N	T	D	V	V	Y	T	S	S	R	F	V	F	G	T	D	I	S	V	D
Template Known Secondary structure						S	S	T	T													T	T										T	T	T								S	S	S	S							T	T	S		S	B		G	G	G								T	T			S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		136	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	R	T	L	W	V	P	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	G	G	L	W	F	M	S	N	G
Template Known Secondary structure		T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions