Return to main results Retrieve Phyre Job Id

Job DescriptionP52697
Confidence99.71%DateThu Jan 5 12:06:01 GMT 2012
Rank56Aligned Residues271
% Identity13%Templatec3ow8A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:wd repeat-containing protein 61; PDBTitle: crystal structure of the wd repeat-containing protein 61
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS
Query Conservation   



   
  
 
 
                  
  

 



  
 

   
  
 
                     
Alig confidence 














































.
















....










Template Conservation    
 


 
  
 


              
   
            .                 ....           
Template Sequence  ETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIA. ASSSLDAHIRLWDLENG. . . . KQIKSIDAGPV
Template Known Secondary structure 
TTS
TT


SS

SSSS.TTSTTTT....

TT
Template Predicted Secondary structure 



















.








....










Template SS confidence 















































































   33......40.........50.........60.........70......... 80.........90...... ...100.......
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  PTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV
Query Conservation                        
                                            
            
Alig confidence 






































...





































Template Conservation                                         ...                                      
Template Sequence  DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT. . . RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH
Template Known Secondary structure 




TTSS
TTSTTT
S
...SSS

TTSSTTS
TTTT
Template Predicted Secondary structure 






































...
































Template SS confidence 















































































   108.110.........120.........130.........140...... ...150.........160.........170.........180....
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL
Query Conservation                                                                        
  
      
Alig confidence 





.................
























































Template Conservation        .................                                                        
Template Sequence  TLEGHA. . . . . . . . . . . . . . . . . MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF
Template Known Secondary structure 


S.................S



TTS

TTS
TTT




SS

TTSS
Template Predicted Secondary structure 


.................






























Template SS confidence 















































































   185....190 .........200.........210.........220.........230.........240.......
 
   244.....250.........260.........270.........280.........290.........300....
Predicted Secondary structure 






















Query SS confidence 




























































Query Sequence  YACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI
Query Conservation                                      

 



  
 

      
 
   
Alig confidence  .


























...




















.







Template Conservation  . 


 

 
 


            
 ...  
  
  
 
   
 
 
 
.
 
 



Template Sequence  . VSSSSDKSVKVWDVGTRTCVHTFFDHQ. . . DQVWGVKYNGNGSKIVSVGDD. QEIHIYDC
Template Known Secondary structure  .TTS
TTTT


S...S

TTSSTT.


Template Predicted Secondary structure  .










...








.

Template SS confidence 




























































   248.250.........260.........270.... .....280.........290..... ....300...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions