Job Description P52697 Confidence 98.01% Date Thu Jan 5 12:06:01 GMT 2012 Rank 152 Aligned Residues 258 % Identity 7% Template c3no2A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein of unknown function (baccac_01654) from2 bacteroides caccae at 1.35 a resolution Resolution 1.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G
Query Conservation
Alig confidence																						.																														.	.	.														.	.	.	.
Template Conservation																						.																														.	.	.														.	.	.	.
Template Sequence		Q	H	L	L	V	G	G	S	G	W	N	K	I	A	I	I	N	K	D	T	.	K	E	I	V	W	E	Y	P	L	E	K	G	W	E	C	N	S	V	A	A	T	K	A	G	E	I	L	F	S	.	.	.	Y	S	K	G	A	K	X	I	T	R	D	G	R	.	.	.	.	E	L	W	N	I	A	A	P	A	G
Template Known Secondary structure									T	T		S							T	T	T	.	T										T	T										T	T	S						.	.	.		B	S							T	T	S		.	.	.	.									T	T
Template Predicted Secondary structure																						.																														.	.	.														.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	.	.	.	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		C	E	X	Q	T	A	R	I	L	P	D	G	N	A	L	V	A	W	C	G	H	P	S	T	I	L	E	V	N	X	K	G	E	V	L	S	K	T	E	F	E	T	G	I	E	R	P	H	A	Q	F	R	Q	I	N	K	N	K	K	G	N	Y	L	V	P	L	F	A	T	S	E	V	R	E	I	A	P	N	G	Q
Template Known Secondary structure											T	T	S								S	T	T								T	T	S											S		S	S	G	G	G	S		S						T	T	S							T	T	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	N	S	V	K	L	S	G	T	P	F	S	S	A	F	L	D	N	G	D	C	L	V	A	C	G	D	A	H	C	F	V	Q	L	N	L	E	S	N	R	I	V	R	R	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	D	I	E	G	V	Q	L	F	F	V	A	Q	L	F	P	L	Q	N
Template Known Secondary structure									S	S									T	T	S							B	T	T	S							T	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S	B	S				S									T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.														.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.
Query Sequence		G	R	H	L	Y	A	.	.	.	.	.	.	.	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N
Query Conservation								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	L	Y	I	C	N	W	Q	G	H	D	R	E	A	G	K	G	K	H	P	Q	L	V	E	I	D	S	E	G	K	V	V	W	Q	L	N	D	K	V	K	F	G	X	I	S	T	I	C
Template Known Secondary structure		S									T	T		T	T	G	G	G	S				S						T	T	S	B								T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions