Job Description P52697 Confidence 97.19% Date Thu Jan 5 12:06:01 GMT 2012 Rank 156 Aligned Residues 278 % Identity 12% Template c3iumA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state Resolution 2.25 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.
Predicted Secondary structure																													.	.	.	.																																														.	.	.
Query SS confidence																													.	.	.	.																																														.	.	.
Query Sequence		D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	.	.	.	.	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	.	.	.	N
Query Conservation																													.	.	.	.																																														.	.	.
Alig confidence																													.	.	.	.										.	.	.	.																																	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		D	G	T	T	A	L	D	Q	L	S	F	S	R	D	G	R	I	L	A	Y	S	L	S	L	A	G	S	D	W	R	E	I	H	L	X	D	V	E	S	K	.	.	.	.	Q	P	L	E	T	P	L	K	D	V	K	F	S	G	I	S	W	L	G	N	E	G	F	F	Y	S	S	Y	D	K	P	T	D	Q	H	K
Template Known Secondary structure		T	S											T	T	S	S									T	T		S									T	T	T	T	.	.	.	.												S							T	T	T							S	S
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.																					.	.	.
Query SS confidence																					.	.	.																					.	.	.
Query Sequence		V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	.	.	.	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	.	.	.	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R
Query Conservation																					.	.	.																					.	.	.
Alig confidence																					.	.	.																					.	.	.																																	.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		V	Y	F	H	R	L	G	T	A	Q	E	D	D	R	L	V	F	G	A	I	P	A	Q	H	H	R	Y	V	G	A	T	V	T	E	D	D	R	F	L	L	I	S	A	A	N	S	T	S	G	N	R	L	Y	V	K	D	L	S	Q	E	N	A	P	L	L	T	V	Q	G	D	L	D	A	D	V	S	L	.	.	.
Template Known Secondary structure							T	T	S		G	G	G						S		S	G	G	G			S								T	T	S									S	S	S	S									T	T	S	T	T									S	S	S	S					.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S
Query Conservation
Alig confidence		.	.																												.	.	.	.	.	.	.	.
Template Conservation		.	.																												.	.	.	.	.	.	.	.
Template Sequence		.	.	V	D	N	K	G	S	T	L	Y	L	L	T	N	R	D	A	P	N	R	R	L	V	T	V	D	A	A	.	.	.	.	.	.	.	.	N	P	G	P	A	H	W	R	D	L	I	P	E	R	Q	Q	V	L	T	V	H	S	G	S	G	Y	L	F	A	E	Y	X	V	D	A	T	A	R	V	E	Q	F	D
Template Known Secondary structure		.	.					T	T								T	T		T	T								T	T	.	.	.	.	.	.	.	.	S			G	G	G									S	S								T	T									T	T
Template Predicted Secondary structure		.	.																												.	.	.	.	.	.	.	.
Template SS confidence
				284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310									.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	.	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P	M	W	V	V	V
Query Conservation																																									.
Alig confidence																.																									.
Template Conservation																.
Template Sequence		Y	E	G	K	R	V	R	E	V	A	L	P	G	L	.	G	S	V	S	G	F	N	G	K	H	D	D	P	A	L	Y	F	G	F	E	N	Y	A	Q	P	P	T	L	Y	R	F	E	P	K	S	G	A	I	S	L	Y	R	A	S	A	A	P	F	K	P	E	D	Y	V	S
Template Known Secondary structure		T	T	S									S	S	S	.	S									T	T		S	S								T	T										T	T	T											S	S			G	G	G
Template Predicted Secondary structure																.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions