Job Description P52697 Confidence 96.89% Date Thu Jan 5 12:06:01 GMT 2012 Rank 160 Aligned Residues 279 % Identity 9% Template c3hxjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyrrolo-quinoline quinone; PDBTitle: crystal structure of pyrrolo-quinoline quinone (pqq_dh) from2 methanococcus maripaludis, northeast structural genomics consortium3 target mrr86 Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S
Query Conservation
Alig confidence					.													.											.	.																								.	.	.	.	.	.
Template Conservation					.													.											.	.																								.	.	.	.	.	.
Template Sequence		T	I	Y	.	L	G	S	S	N	K	N	L	Y	A	I	N	.	T	D	G	S	V	K	W	F	F	K	.	.	S	G	E	I	I	E	C	R	P	S	I	G	K	D	G	T	I	Y	F	G	S	D	K	.	.	.	.	.	.	V	Y	A	I	N	P	D	G	T	E	K	W	R	F	D	T	S	D	F	T	I	F
Template Known Secondary structure					.		S	S	T	T	T	T	T					.	T	T	S					S	S		.	.	G	G	G									T	T	T	T					S	S			.	.	.	.	.	.								G	G	G	G	G	G	S
Template Predicted Secondary structure					.													.											.	.																								.	.	.	.	.	.
Template SS confidence
		32	.	.		.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V
Query Conservation
Alig confidence																																													.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		E	D	I	L	Y	V	T	S	X	D	G	H	L	Y	A	I	N	T	D	G	T	E	K	W	R	F	K	T	K	K	A	I	Y	A	T	P	I	V	S	E	D	G	T	.	.	.	.	.	I	Y	V	G	S	N	D	N	Y	L	Y	A	I	N	P	D	G	T	E	K	W	R	F	K	T	N	D	A	I	T	S	A
Template Known Secondary structure		T	T							T	T	S							T	T	S									S	S				S						T	T	S		.	.	.	.	.						T	T	S							T	T	S									S	S				S
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.
Query Sequence		A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	.	.	.	.	.	.	.	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I
Query Conservation																																					.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	I	G	K	D	G	T	I	Y	F	G	S	D	K	V	Y	A	I	N	P	D	G	T	E	K	W	N	F	Y	A	G	Y	W	T	V	T	R	P	A	I	S	E	D	G	T	I	Y	V	T	S	L	D	G	H	L	Y	A	I	N	P	D	G	T	E	K	W	R	F	K	T	G	K	R	I	E	S	S	P	V
Template Known Secondary structure						T	T							S	S	S						T	T	S									S	S				S						T	T	S							T	T	T							T	T	S									S	S				S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E
Query Conservation
Alig confidence																.	.	.																				.	.														.
Template Conservation																.	.	.																				.	.														.
Template Sequence		I	G	N	T	D	T	I	Y	F	G	S	Y	D	G	.	.	.	H	L	Y	A	I	N	P	D	G	T	E	K	W	N	F	E	T	G	S	.	.	W	I	I	A	T	P	V	I	D	E	N	G	T	.	I	Y	F	G	T	R	N	G	K	F	Y	A	L	F	N
Template Known Secondary structure				T	T	S							T	T		.	.	.							T	T	S									S	S	.	.				S						T	T			.						T	T	S
Template Predicted Secondary structure																.	.	.																				.	.														.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions