Job Description P52697 Confidence 99.44% Date Thu Jan 5 12:06:01 GMT 2012 Rank 103 Aligned Residues 262 % Identity 12% Template c3hrpA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics protein of unknown function2 (np_812590.1) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a3 resolution Resolution 1.70 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L
Query Conservation
Alig confidence															.																				.	.	.	.
Template Conservation															.																				.	.	.	.
Template Sequence		K	Y	X	W	G	I	A	A	V	G	N	N	T	.	V	L	A	Y	Q	R	D	D	P	R	V	R	L	I	S	V	D	D	N	.	.	.	.	K	V	T	T	V	H	P	G	F	K	G	G	K	P	A	V	T	K	D	K	Q	R	V	Y	S	I	G	W	E	G	T	H	T	V	Y	V	Y	X	K	A	S	G	W
Template Known Secondary structure											S	T	T		.						T	T	T	T							T	T	T	T	.	.	.	.								T			B		B					T	T	S	S						B	S	S	T	T								G	G	G	T	T
Template Predicted Secondary structure															.																				.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		116	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		P	V	G	V	.	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		A	P	T	R	I	G	Q	L	G	S	T	F	S	G	K	I	G	A	V	A	L	D	E	T	E	E	W	L	Y	F	V	D	S	N	K	N	F	G	R	F	N	V	K	T	Q	E	V	T	L	I	K	Q	L	E	L	S	G	S	L	G	T	N	P	G	P	Y	L	I	Y	Y	F	V	D	S	N	F	Y	X	S	D
Template Known Secondary structure											T	T	S		S				B					T	T	S	S							T	T								T	T	T													S					S	S								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	.	.	.	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.																																		.
Template Conservation																																																																						.
Template Sequence		Q	N	L	S	S	V	Y	K	I	T	P	D	G	E	C	E	W	F	C	G	S	A	T	Q	K	T	V	Q	D	G	L	R	E	E	A	L	F	A	Q	P	N	G	X	T	V	D	E	D	G	N	F	Y	I	V	D	G	F	K	G	Y	C	L	R	K	L	D	I	L	.	D	G	Y	V	S	T	V	A	G	Q	V
Template Known Secondary structure		T	T	T	T							T	T										T	T			S		B				G	G	G		B		S	S								T	T								T	T	T	T								T	T	.	T	T									T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.
		272	.	.	.													.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	E	T	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																														.
Template Sequence		D	V	A	S	Q	I	D	G	T	P	L	E	A	T	F	N	Y	P	Y	D	I	C	Y	D	G	E	G	G	.	Y	W	I	A	E	A	W	G	K	A	I	R	K	Y	A	V
Template Known Secondary structure		T		B	S				B	S	T	T	T			B	S	S								S	S	S		.						S	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions