Job Description P52697 Confidence 99.69% Date Thu Jan 5 12:06:01 GMT 2012 Rank 66 Aligned Residues 282 % Identity 12% Template c3fm0A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:protein ciao1; PDBTitle: crystal structure of wd40 protein ciao1 Resolution 1.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	.	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G
Query Conservation																															.
Alig confidence																															.																			.																		.	.	.
Template Conservation																																																		.																		.	.	.
Template Sequence		T	L	L	A	S	C	G	G	D	R	R	I	R	I	W	G	T	E	G	D	S	W	I	C	K	S	V	L	S	E	G	H	Q	R	T	V	R	K	V	A	W	S	P	C	G	N	Y	L	.	A	S	A	S	F	D	A	T	T	C	I	W	K	K	N	Q	D	.	.	.	F	E	C	V	T	T	L	E	G	H	E
Template Known Secondary structure		S							T	T	S									T	T										S	S		S	S									T	T	S	S			.					T	T	S											.	.	.											S
Template Predicted Secondary structure																																																		.																		.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	V	K	S	V	A	W	A	P	S	G	N	L	L	A	T	C	S	R	D	K	S	V	W	V	W	E	V	D	E	E	D	E	Y	E	C	V	S	V	L	N	S	H	T	Q	D	V	K	H	V	V	W	H	P	S	Q	E	L	L	A	S	A	S	Y	D	D	T	V	K	L	Y	R	E	E	E	D	D	W	V
Template Known Secondary structure		S									T	T	S	S							T	T	S									T	T	S													S									S	S	S	S							T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.														.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	T	R
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	C	A	T	L	E	G	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	V	W	S	L	A	F	D	P	S	G	Q	R	L	A	S	C	S	D	D	R	T	V	R	I	W	R	Q	Y	L	P	G	N	E	Q	G	V	A	C	S	P	S	W	K	C	I	C	T	L	S	G	F	H	S	R
Template Known Secondary structure										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									T	T	S	S							T	T	S										T	T		T	T																S	S		S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.																.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	.	.	.	.	.	.	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E
Query Conservation																																			.	.	.	.	.	.
Alig confidence																.																			.	.	.	.	.	.
Template Conservation																.
Template Sequence		T	I	Y	D	I	A	W	C	Q	L	T	G	A	L	.	A	T	A	C	G	D	D	A	I	R	V	F	Q	E	D	P	N	S	D	P	Q	Q	P	T	F	S	L	T	A	H	L	H	Q	A	H	S	Q	D	V	N	C	V	A	W	N	P	K	E	P	G	L	L	A	S	C	S	D	D	G	E	V	A	F	W	K
Template Known Secondary structure										T	T	T				.					T	T	S									T	T	S		T	T	S										T	T	S	S	S	S									S	S	S	T	T							T	T	S
Template Predicted Secondary structure																.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		304	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		333	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions