Job Description P52697 Confidence 99.97% Date Thu Jan 5 12:06:01 GMT 2012 Rank 4 Aligned Residues 319 % Identity 27% Template c3fgbB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein q89zh8_bactn; PDBTitle: crystal structure of the q89zh8_bactn protein from2 bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr289b. Resolution 2.00 Å

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		4	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																																																			.	.	.
Query SS confidence						.	.	.																																																			.	.	.
Query Sequence		T	V	Y	I	.	.	.	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	.	.	.	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E
Query Conservation						.	.	.																																																			.	.	.
Alig confidence						.	.	.																																																			.	.	.
Template Conservation
Template Sequence		T	X	I	V	G	T	Y	T	S	G	D	S	K	G	L	Y	S	F	R	F	N	E	E	N	G	T	A	T	A	L	S	E	A	E	V	E	N	P	S	Y	L	V	P	S	A	D	G	K	F	I	Y	A	V	S	E	F	S	N	E	Q	A	A	A	N	A	F	A	F	N	K	E	E	G	T	F	R	L	L	N	T
Template Known Secondary structure										S	S	S											T	T	T												S									S	S	S	S									S	S	T	T										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120													.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	.	.	.	.	.	.	.	.	.	.	.	.	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		Q	K	T	G	.	G	E	D	P	C	Y	I	I	T	N	G	S	N	V	V	T	A	N	Y	S	G	G	S	I	S	V	F	P	I	D	K	D	G	S	L	L	P	A	S	E	V	V	K	F	K	G	S	G	A	D	K	E	R	Q	E	K	P	H	L	H	C	V	R	I	T	P	D	G	K	Y	L	F	A	D	D
Template Known Secondary structure					S	.	S	S									S	S							T	T	T	T							B		T	T	S		B		S												S	S	T	T	T		S	S										T	T	S	S
Template Predicted Secondary structure						.
Template SS confidence
		117	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.
Query Sequence		L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	.	.	.	.	.	.	.	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L
Query Conservation																													.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.																																											.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		L	G	T	D	Q	I	H	K	F	I	V	N	P	N	A	K	A	D	N	E	D	V	F	L	K	E	G	S	P	A	S	Y	K	V	E	A	G	S	G	P	R	H	L	T	F	A	P	N	G	S	Y	A	Y	L	I	N	E	L	S	G	T	V	I	A	F	E	Y	N	D	G	E	L	K	E	I	Q	.	.	.	.
Template Known Secondary structure		T	T	T	T									T	T			T	T	S				S													T	T										T	T	S	S							T	T	T										T	T							.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	.	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H
Query Conservation																																	.
Alig confidence		.																															.
Template Conservation		.
Template Sequence		.	T	I	A	A	D	T	V	G	A	K	G	S	G	D	I	H	I	S	P	D	G	K	F	L	Y	A	S	N	R	L	K	A	D	G	L	A	I	F	S	I	H	P	E	N	G	X	L	T	K	V	G	Y	Q	L	T	G	I	H	P	R	N	F	I	I	T	P	N	G	K	Y	L	L	V	A	C	R	D	S	N
Template Known Secondary structure		.				S		S	S												T	T	S	S								S	S	S										T	T	T												S	S									T	T	S								T	T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P	M	W	V	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	Q	V	Y	E	R	D	T	D	T	G	L	L	T	D	I	R	K	D	I	K	V	D	K	P	V	C	I	K	F
Template Known Secondary structure										T	T	T							S						S	S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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