Job Description P52697 Confidence 99.58% Date Thu Jan 5 12:06:01 GMT 2012 Rank 87 Aligned Residues 290 % Identity 8% Template c3dwlH_ PDB info PDB header:structural protein Chain: H: PDB Molecule:actin-related protein 2/3 complex subunit 1; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P
Query Conservation
Alig confidence																																																			.																.	.	.	.	.	.	.
Template Conservation																																																			.																.	.	.	.	.	.	.
Template Sequence		Q	R	T	E	F	V	T	T	T	A	T	N	Q	V	E	L	Y	E	Q	D	G	N	G	W	K	H	A	R	T	F	S	D	H	D	K	I	V	T	C	V	D	W	A	P	K	S	N	R	I	.	V	T	C	S	Q	D	R	N	A	Y	V	Y	T	W	K	.	.	.	.	.	.	.	Q	T	L	V	L	L	R	L
Template Known Secondary structure		S	S	S							S	S	S		B							T	T								B				S	S									T	T	T				.					T	T	S	S								.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.																.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.								.	.	.	.	90	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H
Query Conservation
Alig confidence																																									.	.	.
Template Conservation																																									.	.	.
Template Sequence		N	R	A	A	T	F	V	R	W	S	P	N	E	D	K	F	A	V	G	S	G	A	R	V	I	S	V	C	Y	F	E	W	W	V	S	K	H	L	K	.	.	.	R	P	L	R	S	T	I	L	S	L	D	W	H	P	N	N	V	L	L	A	A	G	C	A	D	R	K	A	Y	V	L	S	A	Y	V	R	D	V
Template Known Secondary structure		S	S									T	T	S	S							S	S	S							B			B							.	.	.	S	S			S									T	T	S	S							S	S	S										T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	.	.	.	.	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T
Query Conservation																																																												.	.	.	.
Alig confidence																					.																																							.	.	.	.
Template Conservation																					.
Template Sequence		D	K	P	E	A	S	V	W	G	S	R	L	P	F	N	T	V	C	A	.	E	Y	P	S	G	G	W	V	H	A	V	G	F	S	P	S	G	N	A	L	A	Y	A	G	H	D	S	S	V	T	I	A	Y	P	S	A	P	E	Q	P	P	R	A	L	I	T	V	K	L	S	Q	L	P	L	R	S	L	L	W	A
Template Known Secondary structure						S		S	S		S										.					S	S	S								T	T	S	S							T	T	T									S	T	T	S											S	S	S
Template Predicted Secondary structure																					.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.																				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query Sequence		P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	.	.	.	.	S	G	K	Y	L	I	A	A	G	Q
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation
Template Sequence		N	E	S	A	I	V	A	A	G	Y	N	Y	S	P	I	L	L	Q	G	N	E	A	H	T	R	D	L	D	A	G	T	S	K	T	S	F	T	H	T	G	N	T	G	E	G	R	E	E	S	S	L	P	T	V	H	Q	N	M	I	A	T	L	R	P	Y	A	G	T	P	G	N	I	T	A	F	T	S	S	G	T
Template Known Secondary structure			T	T							S	S	S	S											S	B				S							B	S	S	S	S	S	B										S	S	S		S	S												T	T										T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		295	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	H	H	I	S	V	Y	E	I
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		D	.	G	R	V	V	L	W	T	L
Template Known Secondary structure		T	.	S
Template Predicted Secondary structure			.
Template SS confidence
		369		370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions