Job Description P52697 Confidence 99.85% Date Thu Jan 5 12:06:01 GMT 2012 Rank 28 Aligned Residues 300 % Identity 11% Template c3dsmA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bacuni_02894; PDBTitle: crystal structure of the surface layer protein bacuni_02894 from2 bacteroides uniformis, northeast structural genomics consortium3 target btr193d. Resolution 1.90 Å

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		5	.	.	.	.						10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure							.	.	.	.	.																																	.	.	.	.	.
Query SS confidence							.	.	.	.	.																																	.	.	.	.	.
Query Sequence		V	Y	I	A	S	.	.	.	.	.	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	.	.	.	.	.	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F
Query Conservation							.	.	.	.	.																																	.	.	.	.	.
Alig confidence							.	.	.	.	.															.	.	.																.	.	.	.	.																												.	.	.	.
Template Conservation																										.	.	.																																																.	.	.	.
Template Sequence		L	F	I	T	N	E	G	N	F	Q	Y	S	N	A	T	L	S	Y	Y	D	P	A	T	C	.	.	.	E	V	E	N	E	V	F	Y	R	A	N	G	F	K	L	G	D	V	A	Q	S	X	V	I	R	D	G	I	G	W	I	V	V	N	N	S	H	V	I	F	A	I	D	I	N	T	F	.	.	.	.	K	E
Template Known Secondary structure										T	T	S			B							T	T	T	T	.	.	.					S							S	S			B	S									T	T							G	G	G	T							T	T	T		.	.	.	.
Template Predicted Secondary structure																										.	.	.																																																.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	.	.	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C
Query Conservation																																																						.	.
Alig confidence																					.																																	.	.
Template Conservation																					.
Template Sequence		V	G	R	I	T	G	F	T	S	P	R	Y	I	H	F	L	S	D	E	.	K	A	Y	V	T	Q	I	W	D	Y	R	I	F	I	I	N	P	K	T	Y	E	I	T	G	Y	I	E	C	P	D	X	D	X	E	S	G	S	T	E	Q	X	V	Q	Y	G	K	Y	V	Y	V	N	C	W	S	Y	Q	N	R	I	L
Template Known Secondary structure									S	S									T	T	.							B	S		S							T	T	T	T									T	T			T	T	T		B								T	T								T	T
Template Predicted Secondary structure																					.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.
Template Sequence		K	I	D	T	E	T	D	K	V	V	D	E	L	T	I	G	I	Q	P	T	S	L	V	X	D	K	Y	N	K	X	W	T	I	T	D	G	G	Y	E	G	S	P	Y	G	Y	E	A	P	S	L	Y	R	I	D	A	E	T	F	T	V	E	K	Q	F	K	F	K	L	.	.	.	.	.	.	.	G	D	W	P	S
Template Known Secondary structure					T	T	T	T									S	S		B							T	T	S						B			B		T	T		S	S		B										T	T	T	T										T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.								.	.	240	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	.	.	.	.	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q
Query Conservation																																																																.	.	.	.
Alig confidence																																			.	.	.	.																										.	.	.	.													.	.
Template Conservation																																			.	.	.	.																																										.	.
Template Sequence		E	V	Q	L	N	G	T	R	D	T	L	Y	W	I	N	N	D	I	W	R	X	P	V	E	A	D	R	V	P	V	R	P	F	.	.	.	.	L	E	F	R	D	T	K	Y	Y	G	L	T	V	N	P	N	N	G	E	V	Y	V	A	D	A	I	D	Y	Q	Q	Q	G	I	V	Y	R	Y	S	P	Q	G	.	.
Template Known Secondary structure							T	T	S							S	S	S						T	T		S	S			S	S		S	.	.	.	.	B				S	S									T	T	T									T	T	S	S	S									T	T		.	.
Template Predicted Secondary structure																																			.	.	.	.																																										.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P	M	W	V	V	V
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	L	I	D	E	F	Y	V	G	I	I	P	G	A	F	C	W
Template Known Secondary structure		.	.	.											S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions