Job Description P52697 Confidence 99.93% Date Thu Jan 5 12:06:01 GMT 2012 Rank 8 Aligned Residues 274 % Identity 12% Template c3dm0A_ PDB info PDB header:sugar binding protein,signaling protein Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with PDBTitle: maltose binding protein fusion with rack1 from a. thaliana Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	.	.	.	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P
Query Conservation																							.	.	.
Alig confidence																							.	.	.																										.																											.	.	.
Template Conservation																																																			.																											.	.	.
Template Sequence		I	I	V	S	A	S	R	D	K	S	I	I	L	W	K	L	T	K	D	D	K	A	Y	G	V	A	Q	R	R	L	T	G	H	S	H	F	V	E	D	V	V	L	S	S	D	G	Q	F	A	.	L	S	G	S	W	D	G	E	L	R	L	W	D	L	A	A	G	V	S	T	R	R	F	V	G	H	.	.	.	T
Template Known Secondary structure								T	T	S										S	T	T		S											S	S									T	T	S	S			.					T	T	S							T	T	T	T										.	.	.	S
Template Predicted Secondary structure																																																			.																											.	.	.
Template SS confidence
		1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.		.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.				.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	.	.	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D
Query Conservation																																																									.	.
Alig confidence																					.																																				.	.
Template Conservation																					.
Template Sequence		K	D	V	L	S	V	A	F	S	L	D	N	R	Q	I	V	S	A	S	.	R	D	R	T	I	K	L	W	N	T	L	G	E	C	K	Y	T	I	S	E	G	G	E	G	H	R	D	W	V	S	C	V	R	F	S	P	N	T	L	Q	P	T	I	V	S	A	S	W	D	K	T	V	K	V	W	N	L	S	N	C
Template Known Secondary structure		S									T	T	S	S							.	T	T	S							T	T	S								S	S	T	T	S		S	S									S		S	S	S								T	T	S							T	T	T
Template Predicted Secondary structure																					.
Template SS confidence
		1106	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.		.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D
Query Conservation
Alig confidence																	.	.	.	.	.	.								.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.								.																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	R	S	T	L	A	G	H	T	G	Y	V	S	T	.	.	.	.	.	.	V	A	V	S	P	D	G	.	S	L	C	A	S	G	G	K	D	G	V	V	L	L	W	D	L	A	E	G	K	K	L	Y	.	.	.	.	.	.	.	.	.	.	.	S	L	E	A	N	S	V	I	H	A	L	C	F	S	P	N
Template Known Secondary structure											S	S					.	.	.	.	.	.					T	T	S	.	S							T	T	S	B						T	T	T	T					.	.	.	.	.	.	.	.	.	.	.			B		S	S									S	S
Template Predicted Secondary structure																	.	.	.	.	.	.								.																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1185	.	.	.	.	1190	.	.	.	.	.	.	.	.	.							1200	.	.	.	.	.	.		.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230												.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I
Query Conservation
Alig confidence										.	.																																															.
Template Conservation										.	.																																															.
Template Sequence		R	Y	W	L	C	A	A	T	.	.	E	H	G	I	K	I	W	D	L	E	S	K	S	I	V	E	D	L	K	V	D	L	K	K	V	I	Y	C	T	S	L	N	W	S	A	D	G	S	T	L	F	S	G	Y	T	D	.	G	V	I	R	V	W	G	I
Template Known Secondary structure		S	S							.	.	T	T							T	T	T	T																							T	T	S	S							T	T	.	S
Template Predicted Secondary structure										.	.																																															.
Template SS confidence
		1247	.	.	1250	.	.	.	.			.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300		.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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