Job Description P52697 Confidence 99.22% Date Thu Jan 5 12:06:01 GMT 2012 Rank 123 Aligned Residues 285 % Identity 11% Template c3dasA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the pqq-bound form of aldose sugar2 dehydrogenase (adh) from streptomyces coelicolor Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																.																																												.	.	.																	.	.	.
Query SS confidence																.																																												.	.	.																	.	.	.
Query Sequence		H	E	G	A	L	T	L	T	Q	V	V	D	V	P	.	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	.	.	.	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	.	.	.
Query Conservation																.																																												.	.	.																	.	.	.
Alig confidence																.																.																												.	.	.																	.	.	.
Template Conservation																																.
Template Sequence		A	K	G	S	V	K	V	L	R	T	V	A	T	G	L	N	S	P	W	G	L	A	P	L	P	G	G	D	L	L	.	V	S	S	R	D	E	A	T	I	T	R	V	D	A	K	T	G	R	K	T	E	L	G	E	V	P	G	V	S	P	S	G	E	G	G	L	L	G	I	A	L	S	P	D	Y	A	S	D	H
Template Known Secondary structure		S	S														S	S								T	T	S				.				T	T	T								T	T	T										T	T				B	T	T	B	S								T	T
Template Predicted Secondary structure																																.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
														95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	V	Y	A	Y	F	T	S	A	S	D	N	R	I	V	R	X	L	Y	D	E	K	K	P	S	G	E	Q	L	G	A	P	D	T	V	F	R	G	I	P	K	G	V	I	H	N	G	G	R	I	A	F	G	P	D	K	X	L	Y	A	G	T	G	E	S	G	D	T	G	L	S	Q	D	R	K	S	L	G	G	K
Template Known Secondary structure										S	S	S								B		T	T	S		T	T			B														S	S										T	T	S							B		T	T		G	G	G	T	T		T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	R	X	T	P	D	G	E	P	A	P	G	N	P	F	P	G	S	P	V	Y	S	Y	G	H	R	N	V	Q	G	L	A	W	D	D	K	Q	R	L	F	A	S	E	F	G	Q	D	T	W	D	E	L	N	A	I	K	P	G	D	N	Y	G	W	P	E	A	E	G	K	G	G	G	S	G	F	H	D	P	V
Template Known Secondary structure							T	T	S	S	B		T	T		S	S	T	T						B			S	B								T	T										S	S	S									T	T		B			T	T	T			S	S				T	T					S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
			224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																																												.	.	.	.
Query SS confidence		.																																																																												.	.	.	.
Query Sequence		.	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	.	.	.	.
Query Conservation		.																																																																												.	.	.	.
Alig confidence		.																																																																												.	.	.	.
Template Conservation
Template Sequence		A	Q	W	S	T	D	E	A	S	P	S	G	I	A	Y	A	E	G	S	V	W	X	A	G	L	R	G	E	R	L	W	R	I	P	L	K	G	T	A	A	A	A	D	P	Q	A	F	L	E	G	E	Y	G	R	L	R	T	V	A	P	A	G	G	D	K	L	W	L	V	T	S	N	T	D	G	R	G	D	A	K
Template Known Secondary structure						T	T	T										T	T							S	T	T		S								T	T			S	S						S	T	T	T	S	S										T	T								T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
					299	300	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	I	S	V	Y	E	I	V	G	E
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		G	G	D	D	R	I	L	E	L	E	V	E
Template Known Secondary structure		T	T		S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions