Job Description P52697 Confidence 99.87% Date Thu Jan 5 12:06:01 GMT 2012 Rank 20 Aligned Residues 307 % Identity 14% Template c3c75J_ PDB info PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin Resolution 2.50 Å

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		3	.	.	.	.	.					.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.										.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																																																.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.																																																.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	V	Y	I	A	.	.	.	.	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	.	.	.	.	.	.	.	.	.	P	E	F	R	V	L	A	Y	R	I	A	P	D	D
Query Conservation								.	.	.	.																																																.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																.	.	.													.																	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.													.
Template Sequence		R	R	V	Y	I	Q	D	P	A	H	F	A	A	I	T	Q	Q	F	V	I	D	G	S	T	G	.	.	.	R	I	L	G	M	T	D	G	G	F	L	P	.	H	P	V	A	A	E	D	G	S	F	F	A	Q	A	S	T	V	F	E	R	I	A	R	G	K	R	T	D	Y	V	E	V	F	D	P	V	T	F	L
Template Known Secondary structure		T								T	T	T		S	S								T	T	T	T	.	.	.										S	S		.						T	T	S	S												T	T													T	T	T
Template Predicted Secondary structure																											.	.	.													.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure												.	.	.	.																									.
Query SS confidence												.	.	.	.																									.
Query Sequence		G	A	L	T	F	A	A	E	S	A	.	.	.	.	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	.	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P
Query Conservation												.	.	.	.																									.
Alig confidence												.	.	.	.																									.																				.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		P	I	A	D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	Q	W	M	N	A	L	T	P	D	N	K	N	L	L	F	Y	Q	F	S	P	A	P	A	V	G	V	V	D	L	E	G	K	T	F	D	R	M	L	D	V	.	.	.	.	.	.	P	D	C	Y	H	I	F	P	A	S	P	T	V	F	Y	M
Template Known Secondary structure									T	T							S			G	G	G	S				T	T	S	S								S	S	S								T	T	T	T									.	.	.	.	.	.		S									T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	C	R	D	G	S	L	A	R	V	D	F	A	D	G	E	T	K	V	T	N	T	E	V	F	H	T	E	D	E	L	L	I	N	H	P	A	F	S	L	R	S	G	R	L	V	W	P	T	Y	T	G	K	I	F	Q	A	D	L	T	A	E	G	A	T	F	R	A	P	I	E	A	L	T	E	A	E	R	A	D
Template Known Secondary structure				T	T	S	S								T	T											S		T	T	S		B		S						T	T	T							B	T	T	S									S	S										S	S		T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.										.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																																									.
Query SS confidence																									.	.	.	.	.	.	.	.	.																																									.
Query Sequence		F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	.	.	.	.	.	.	.	.	.	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	.	Y	L	I	A	A	G	Q
Query Conservation																									.	.	.	.	.	.	.	.	.																																									.
Alig confidence																									.	.	.	.	.	.	.	.	.															.	.	.	.																							.
Template Conservation																																																.	.	.	.
Template Sequence		D	W	R	P	G	G	W	Q	Q	T	A	Y	H	R	Q	S	D	R	I	Y	L	L	V	D	Q	R	D	E	W	K	H	K	A	A	S	R	F	V	V	V	L	N	A	E	T	G	.	.	.	.	E	R	I	N	K	I	E	L	G	H	E	I	D	S	I	N	V	S	Q	D	A	E	P	L	L	Y	A	L	S	A
Template Known Secondary structure		T					S	S	S						T	T	T	T											T	T		T	T	S										T	T	T		.	.	.	.																				S	S	S								T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360					.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	.	V	G	Q	G	P	M	W	V	V
Query Conservation																										.
Alig confidence										.	.						.	.								.
Template Conservation										.	.						.	.
Template Sequence		G	T	Q	T	L	H	I	Y	.	.	D	A	A	T	G	.	.	E	E	L	R	S	V	D	Q	L	G	R	G	P	Q	I	I	T
Template Known Secondary structure		T	T	T						.	.		T	T	T		.	.										S	S	S
Template Predicted Secondary structure										.	.						.	.
Template SS confidence
		391	.	.	.	.	.	.	.			.	400	.	.	.			.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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