Job Description P52697 Confidence 99.94% Date Thu Jan 5 12:06:01 GMT 2012 Rank 7 Aligned Residues 276 % Identity 17% Template c3bwsA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:protein lp49; PDBTitle: crystal structure of the leptospiral antigen lp49 Resolution 1.99 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		K	Q	T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	.	.	.	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.																			.																									.	.	.
Template Conservation																																																						.																									.	.	.
Template Sequence		N	T	R	L	A	I	P	L	L	E	D	E	G	X	D	V	L	D	I	N	S	G	Q	T	V	R	L	S	P	P	E	K	Y	K	K	K	L	G	F	V	E	T	I	S	I	P	E	H	N	E	L	W	.	V	S	Q	X	Q	A	N	A	V	H	V	F	D	L	K	T	L	A	Y	K	A	T	V	D	.	.	.
Template Known Secondary structure		S	S						B	T	T	S	S	S						T	T	T														T	T										G	G	G	T				.				G	G	G	T							T	T	T									.	.	.
Template Predicted Secondary structure																																																						.																									.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.
Query Sequence		A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	.	.	.	.	.	.	.	Q	D	R	I
Query Conservation																																																																							.	.	.	.	.	.	.
Alig confidence																																						.	.	.																															.	.	.	.	.	.	.
Template Conservation																																						.	.	.
Template Sequence		L	T	G	K	W	S	K	I	L	L	Y	D	P	I	R	D	L	V	Y	C	S	N	W	I	S	E	D	I	S	V	I	D	R	K	T	K	.	.	.	L	E	I	R	K	T	D	K	I	G	L	P	R	G	L	L	L	S	K	D	G	K	E	L	Y	I	A	Q	F	S	A	S	N	Q	E	S	G	G	G	R	L
Template Known Secondary structure			S	S	S	S								T	T	T	T							T	T	T	T							T	T	T	T	.	.	.										S									T	T	S	S									S		T	T		S
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A
Query Conservation
Alig confidence																							.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	Y	S	X	D	K	E	K	L	I	D	T	I	G	P	P	G	N	K	R	.	.	.	.	.	.	.	H	I	V	S	G	N	T	E	N	K	I	Y	V	S	D	X	C	C	S	K	I	E	V	Y	D	L	K	E	K	K	V	Q	K	S	I	.	.	.	.	.	.	.	.	.	.	.	P	V	F	D	K	P
Template Known Secondary structure						T	T	T	T														.	.	.	.	.	.	.						S	S	T	T							T	T	T	T							T	T	T	T							.	.	.	.	.	.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.								330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.												.	.	.	.	.	370
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.															.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		N	T	I	A	L	S	P	D	G	K	Y	L	Y	V	S	C	R	G	P	N	H	P	T	E	G	Y	L	K	K	G	L	V	L	G	K	V	Y	V	I	D	T	T	T	D	.	.	.	.	T	V	K	E	F	W	E	A	G	N	Q	P	T	G	L	D	V	S	P	D	N	R	Y	L	V	I	S	D	F	L	D	H
Template Known Secondary structure								T	T	S	S												T	T	T		T	T	S			S	S									T	T	T	T	.	.	.	.									S	S	S								T	T	S								T	T	T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.					.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	S	V	Y	E	I	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	R	V	Y	R	R	D	G
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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