Job Description P52697 Confidence 98.85% Date Thu Jan 5 12:06:01 GMT 2012 Rank 138 Aligned Residues 272 % Identity 11% Template c3a9gA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of pqq-dependent sugar dehydrogenase apo-form Resolution 2.39 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.								.	.
Query SS confidence																																																																						.	.	.								.	.
Query Sequence		A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	.	.	.	G	Q	F	V	F	V	G	.	.
Query Conservation																																																																						.	.	.								.	.
Alig confidence																									.								.																																					.	.	.								.	.
Template Conservation																									.								.
Template Sequence		K	F	K	I	S	E	V	A	S	D	L	E	V	P	W	S	I	A	P	L	G	G	G	.	R	Y	L	V	T	E	R	.	P	G	R	L	V	L	I	S	P	S	G	K	K	L	V	A	S	F	D	V	A	N	V	G	E	A	G	L	L	G	L	A	L	H	P	E	F	P	K	K	S	W	V	Y	L	Y	A	S
Template Known Secondary structure											S		S										T	T	.							T	.	T	T							S	S													S	T	T		S								T	T	T	T	T	S
Template Predicted Secondary structure																									.								.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																									.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																									.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	.	.	.	.	.	.	.	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P
Query Conservation		.	.	.	.	.																									.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	A	E	G	G	H	I	R	N	R	V	I	R	G	R	L	D	G	S	T	F	K	L	K	E	V	K	T	L	I	D	G	I	P	G	A	Y	I	H	N	G	G	R	I	R	F	G	P	D	G	M	L	Y	I	T	T	G	D	A	A	D	P	R	L	A	Q	D	L	S	S	L	A	G	K	I	L	R	V	D
Template Known Secondary structure					G	G	G													S	S	S																	S	S										T	T	S									T	T		G	G	G	G	T		T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		168	.	170	.														.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220									.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.															.																																				.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.															.																																				.	.	.	.	.	.	.	.
Query Sequence		A	E	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	G	A	G	P	R	H	M	V	F	H	P	.	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	.	.	.	.	.	.	.	.	M	P	E	N	F
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.															.																																				.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.															.																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	G	R	P	P	A	D	N	P	F	P	N	S	P	I	W	S	Y	G	H	R	N	P	Q	G	I	D	W	H	R	A	S	G	V	M	V	A	T	E	H	G	P	V	G	H	D	E	V	N	I	I	L	K	G	G	N	Y	G	W	P	L	A	T	G	K	A	G	R	G	E	F	V	D	P	V	I	D	T	G
Template Known Secondary structure		T	T	S				T	T	S	S	S	T	T									S									T	T	T										S	S	S									T	T		B			T	T	T			S					T	T	S				S				T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																	.
Query SS confidence																			.	.	.	.	.	.																																	.
Query Sequence		S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	.	.	.	.	.	.	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	.	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H
Query Conservation																			.	.	.	.	.	.																																	.
Alig confidence																			.	.	.	.	.	.																																	.
Template Conservation
Template Sequence		S	E	T	W	A	P	S	G	A	S	F	V	H	G	D	M	F	P	G	L	R	G	W	L	L	I	A	C	L	R	G	S	M	L	A	A	V	N	F	G	D	N	M	E	V	R	K	I	S	T	F	F	K	N	V	F	G	R	L	R	D	V	V	I	D	D	D	G	G	I	L	I	S	T	S	N	R	D	G	R
Template Known Secondary structure		T													S	S	S		G	G	G	T	T							T	T	T	T									G	G	G										T	T	T	S										T	T	S								T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions