Job Description P52697 Confidence 42.55% Date Thu Jan 5 12:06:01 GMT 2012 Rank 189 Aligned Residues 278 % Identity 10% Template c2xbgA_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:ycf48-like protein; PDBTitle: crystal structure of ycf48 from thermosynechococcus2 elongatus Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P
Query Conservation
Alig confidence											.									.																																						.	.	.
Template Conservation											.									.																																						.	.	.
Template Sequence		R	H	H	G	W	L	V	G	V	.	N	A	T	L	M	E	T	R	.	D	G	G	Q	T	W	E	P	R	T	L	V	L	D	H	S	D	Y	R	F	N	S	V	S	F	Q	G	N	E	G	W	I	V	G	E	P	P	.	.	.	I	M	L	H	T	T	D	G	G	Q	S	W	S	Q	I	P	L	D	P	K	L
Template Known Secondary structure		S	S							T	.	T	T						S	.	S	T	T	S	S									S													T	T								T	T	.	.	.						S	S	T	T	S	S								T	T
Template Predicted Secondary structure											.									.																																						.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		P	G	S	P	R	L	I	K	A	L	G	N	G	S	A	E	M	I	T	N	V	G	A	.	.	.	I	Y	R	T	K	D	S	G	K	N	W	Q	A	L	V	Q	E	A	I	G	V	M	R	N	L	N	R	S	P	S	G	E	Y	V	A	V	S	S	R	G	S	F	Y	S	T	W	E	P	G	Q	T	A	W	E
Template Known Secondary structure		S	S										T	T							T	T			.	.	.					S	S	T	T	S	S							S												T	T	S							T	T	S	S							T	T		S	S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	H	N	R	T	T	S	R	R	L	H	N	M	G	F	T	P	D	G	R	L	W	M	I	V	N	G	G	K	I	A	F	S	D	P	D	N	S	E	N	W	G	E	L	L	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	R	N	S	V	G	F	L	D	L	A	Y	R	T	P	N	E
Template Known Secondary structure							S	S	S									T	T	S							T	T	T							T	T									B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S			S								S	S	S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E
Query Conservation
Alig confidence											.	.	.																																			.								.
Template Conservation											.	.	.																																			.								.
Template Sequence		V	W	L	A	G	G	A	G	A	.	.	.	L	L	C	S	Q	D	G	G	Q	T	W	Q	Q	D	V	D	V	K	K	V	P	S	N	F	Y	K	I	L	F	F	S	P	D	Q	.	G	F	I	L	G	Q	K	.	G	I	L	L	R	Y	V	T	D	L	T
Template Known Secondary structure							S	T	T		.	.	.					S	S	T	T	S	S					G	G	G	T	T	S	S	S										T	T		.						S	T	.	T										T
Template Predicted Secondary structure											.	.	.																																			.								.
Template SS confidence
		283	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions