Job Description P52697 Confidence 96.13% Date Thu Jan 5 12:06:01 GMT 2012 Rank 164 Aligned Residues 296 % Identity 13% Template c2vz1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:galactose oxidase; PDBTitle: premat-galactose oxidase Resolution 1.91 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.											60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.															.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.															.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	.	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	.	.	.	.	.	.	.	.	.	.	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V
Query Conservation																		.															.	.	.	.	.	.	.	.	.	.
Alig confidence																		.															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	I	D	L	P	I	V	P	A	A	A	A	I	E	P	T	S	G	R	V	L	M	W	S	S	Y	R	N	D	A	F	G	G	S	P	G	G	I	T	L	T	S	S	W	D	P	S	T	G	I	V	S	D	R	T	V	T	V	T	K	H	D	M	F	C	P	G	I	S	M	D	G	N	G	Q	I	V	V	T
Template Known Secondary structure							S	S			S						T	T	T	T							S	S	S	S	S			T	T			S	S									T	T	T										T	T					S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	.	.	.	.	.	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V
Query Conservation																																																	.	.	.	.	.
Alig confidence																			.																														.	.	.	.	.
Template Conservation																			.
Template Sequence		G	G	N	D	A	K	K	T	S	L	Y	D	S	S	S	D	S	.	W	I	P	G	P	D	M	Q	V	A	R	G	Y	Q	S	S	A	T	M	S	D	G	R	V	F	T	I	G	G	S	W	S	G	G	V	F	E	K	N	G	E	V	Y	S	P	S	S	K	T	W	T	S	L	P	N	A	K	V	N	P	M	L
Template Known Secondary structure			S	S	S	T	T							T	T	T	T		.								S	S			B	S							T	T	S								B	T	S	S		S	S									T	T	T	T						T	T	S		S	G	G	G
Template Predicted Secondary structure																			.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		174	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		E	G	A	G	P	R	.	.	.	.	.	.	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	D	K	Q	G	L	Y	R	S	D	N	H	A	W	L	F	G	W	K	K	G	S	V	F	Q	A	G	P	S	T	A	M	N	W	Y	Y	T	S	G	S	G	D	V	K	S	A	G	K	R	Q	S	N	R	G	V	A	P	D	A	M	C	G	N	A	V	M	Y	D	A	V	K	G	K	I	L	T	F	G	G
Template Known Secondary structure					T	T	T					T	S	S							G	G	G							S	S	S								S	T	T												T	T							B	T								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		248	.	250											.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.											.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	A	.	.	.	.	.	.	.	.	.	.	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	.	.	.	.	.	.	.	.	.	.	H	I	S	V	Y	E	I	V	G	E
Query Conservation					.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																																																													.	.
Template Sequence		S	P	D	Y	Q	D	S	D	A	T	T	N	A	H	I	I	T	L	G	E	P	G	T	S	P	N	T	V	F	A	S	N	G	L	Y	F	A	R	T	F	H	T	S	V	V	L	P	D	G	S	T	F	I	T	G	G	Q	R	R	G	I	P	F	E	D	S	T	P	V	F	T	P	E	I	Y	.	.	V	P	E
Template Known Secondary structure		B	S	S	S	S	S	S	B												S	T	T	S								T	T			S	S			B	S							T	T	S								B	S	B			T	T				S	B								.	.		G	G
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.			.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P	M	W	V	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	T	F	Y	K	Q	N	P	N	S	I	V	R	V	Y	H	S	I	S	L
Template Known Secondary structure		G	T									S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions