Job Description P52697 Confidence 98.81% Date Thu Jan 5 12:06:01 GMT 2012 Rank 140 Aligned Residues 285 % Identity 10% Template c2qtbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dipeptidyl peptidase 4; PDBTitle: human dipeptidyl peptidase iv/cd26 in complex with a 4-aryl2 cyclohexylalanine inhibitor Resolution 2.25 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	.	.	.	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	.	.	.	.	.	.	.	.	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A
Query Conservation																				.	.	.																											.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																											.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		Q	E	N	N	I	L	V	F	N	A	E	Y	G	N	S	S	V	F	L	E	N	S	T	F	D	E	F	G	H	S	I	N	D	Y	S	I	S	P	D	G	Q	F	I	L	L	E	Y	N	Y	V	K	Q	W	R	H	S	Y	T	A	S	Y	D	I	Y	D	L	N	K	R	.	.	.	.	Q	L	I	T	E	E	R
Template Known Secondary structure			T	T							T	T	T									T	T	T	T	T	T	S	S	S									T	T	S	S												S	S	S											T	T	T	T	.	.	.	.					S	S
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	A	N	I	S	P	D	N	R	T	L	W	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		I	P	N	N	T	Q	W	V	T	W	S	P	V	G	H	K	L	A	Y	V	W	.	.	N	N	D	I	Y	V	K	I	E	P	N	L	P	S	Y	R	I	T	W	T	G	K	E	D	I	I	Y	N	G	I	T	D	W	V	Y	E	E	E	V	F	S	A	Y	S	A	L	W	W	S	P	N	G	T	F	L	A	Y
Template Known Secondary structure				S	S	B							S	S	T	T							.	.	T	T						S	S	T	T	S							S			B	T	T	T				S	B									T	T	S	S	S	B						T	T	S	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	F	N	D	T	E	V	P	L	I	E	Y	S	F	Y	S	D	E	S	L	Q	Y	P	K	T	V	R	V	P	Y	P	K	A	G	A	V	N	P	T	V	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	V	N	T	D	S	L	S	S	V	T	N	A	T	S	I	Q	I	T	A	P	A	S
Template Known Secondary structure							T	T											S	T	T		S	S										B	T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	T	T	T	S	S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.														.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.											.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																									.	.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	.	.	.	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	.	.	.	.	.	.	.	.	.	.	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I
Query Conservation																									.	.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	I	G	D	H	Y	L	C	D	V	T	W	A	T	Q	E	R	I	S	L	Q	W	L	R	R	I	Q	N	Y	S	V	M	D	I	C	D	Y	D	E	S	S	G	R	W	N	C	L	V	A	R	Q	H	I	E	M	S	T	T	G	W	V	G	R	F	R	P	S	E	P	H	F	T	L	D	G	N	S	F	Y
Template Known Secondary structure				T	S												T	T									S	S	T	T											T	T	T	T						G	G	G							S	S	S		S	S	S	S	S								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		291		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		A	.	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		K	I	I	S	N	E	E	G	Y	R	H	I	C	Y	F	Q	I	D	K	K	D	C	T	F	I
Template Known Secondary structure							T	T	S									T	T		S					S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions