Phyre 2 alignment of P52697 with c2qe8B

Job Description P52697
Confidence 99.20% Date Thu Jan 5 12:06:01 GMT 2012

Rank 125 Aligned Residues 259

% Identity 12% Template c2qe8B_

PDB info PDB header:hydrolase Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative hydrolase (ava_4197) from anabaena2 variabilis atcc 29413 at 1.35 a resolution

Resolution 1.35 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																													.	.	.
Query SS confidence																																.	.																													.	.	.
Query Sequence	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	.	.	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	.	.	.	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G
Query Conservation																																.	.																													.	.	.
Alig confidence							.	.																	.							.	.																													.	.	.
Template Conservation							.	.																	.
Template Sequence	R	L	E	V	V	A	.	.	E	L	S	L	A	P	G	N	I	T	L	T	P	D	G	R	.	L	F	L	S	L	H	Q	F	Y	Q	P	E	X	Q	V	A	E	L	T	Q	D	G	L	I	P	F	P	P	Q	S	G	N	A	I	I	T	F	D	T	V	L	G	I	K	S	D	G	N	G	I	V	W	X	L	D
Template Known Secondary structure							.	.			S	S									T	T	S		.							G	G	G			S		S						T	T					S					S	S		S				S									S	S	S
Template Predicted Secondary structure							.	.																	.
Template SS confidence
	7	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	N	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	K	S	V	P	K	L	V	A	W	D	T	L	N	N	Q	L	S	R	V	I	Y	L	P	P	P	I	T	L	S	N	S	F	V	N
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	S									T	T	T	T										T	T	S	S		T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	84	.	.																																										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																							.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	L	A	V	D	L	I	H	N	F	V	Y	I	S	D	P	A	P	D	D	K	A	A	L	I	R	V	D	L	Q	T	G	L	A	A	R	V	L	Q	G	Y	P	G	I	A	P	E	D	I	D	L	V	I	D	G	V	P	V	Q	I	G	Q	P	D	G	T	V	I	R	P	H	L	G	V	N	G	I	V	L	D
Template Known Secondary structure						T	T	T	T									S	G	G	G								T	T	T								T	T		T	T	T	S			S						T	T				B				T	T	S
Template Predicted Secondary structure
Template SS confidence
	123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

	238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	.	.	.	.	.	.	.	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																															.															.	.
Template Conservation																																																										.															.	.
Template Sequence	A	E	N	E	W	L	Y	L	S	P	X	H	S	T	S	X	Y	R	I	K	S	A	D	L	S	N	L	Q	L	T	D	A	E	L	G	S	K	I	E	R	Y	S	E	K	P	I	C	D	G	I	S	I	D	K	D	H	N	.	I	Y	V	G	D	L	A	H	S	A	I	G	V	I	.	.	T	S	A	D	R	A
Template Known Secondary structure	T	T	S								S	S		S											T		T	T									T									S		S						T	T			.						G	G	G	T						.	.		T	T	T	T
Template Predicted Secondary structure																																																										.															.	.
Template SS confidence
	203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.

	311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence	L	H	E	K	G	R	Y	A	V	G	Q	G	P	M	W	V	V	V	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence	Y	K	L	L	V	T	D	E	K	L	S	W	T	D	S	F	N	F	G	S
Template Known Secondary structure								G	G	G	S									T
Template Predicted Secondary structure
Template SS confidence
	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions