Job Description P52697 Confidence 99.20% Date Thu Jan 5 12:06:01 GMT 2012 Rank 124 Aligned Residues 275 % Identity 8% Template c2qc5A_ PDB info PDB header:lyase Chain: A: PDB Molecule:streptogramin b lactonase; PDBTitle: streptogramin b lyase structure Resolution 1.80 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N
Query Conservation
Alig confidence																												.																.	.	.
Template Conservation																												.																.	.	.
Template Sequence		N	F	Y	L	E	E	F	N	L	S	I	P	D	S	G	P	Y	G	I	T	S	S	E	D	G	K	.	V	W	F	T	Q	H	K	A	N	K	I	S	S	L	D	.	.	.	Q	S	G	R	I	K	E	F	E	V	P	T	P	D	A	K	V	M	C	L	I	V	S	S	L	G	D	I	W	F	T	E	N	G	A
Template Known Secondary structure		S									S	S	T	T										T	T	S		.						T	T	T	T							.	.	.	T	T	S								S	S	T	T										T	T	S							T	T	T
Template Predicted Secondary structure																												.																.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V
Query Conservation
Alig confidence			.	.	.																																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.																																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	.	.	.	K	I	G	K	L	S	K	K	G	G	F	T	E	Y	P	L	P	Q	P	D	S	G	P	Y	G	I	T	E	G	L	N	G	D	I	W	F	T	Q	L	N	G	D	R	I	G	K	L	T	A	D	G	T	I	Y	E	Y	D	L	P	N	K	G	S	Y	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	.	.	.							T	T	S								S	S	T	T										S	T	T							T	T	T	T							T	T	S								S	S	T	T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.																																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																																																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	A	F	I	T	L	G	S	D	N	A	L	W	F	T	E	N	Q	N	N	S	I	G	R	I	T	N	T	G	K	L	E	E	Y	P	L	P	T	N	A	A	A	P	V	G	I	T	S	G	N	D	G	A	L	W	F	V	E	I	M	G	N	K	I	G	R	I	T	.	.	.	.	T	T
Template Known Secondary structure		.	.	.	.	.	.	.							T	T	S	S						T	T	T	T							T	T									S	S	T	T										T	T	S	S						T	T	T	T							.	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																																				.	.	.	.
Template SS confidence
									144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P	M	W	V	V	V	N	A
Query Conservation
Alig confidence																											.																.	.	.
Template Conservation																											.																.	.	.
Template Sequence		G	E	I	S	E	Y	D	I	P	T	P	N	A	R	P	H	A	I	T	A	G	K	N	S	E	.	I	W	F	T	E	W	G	A	N	Q	I	G	R	I	T	.	.	.	N	D	N	T	I	Q	E	Y	Q	L	Q	T	E	N	A	E	P	H	G	I	T	F	G	K
Template Known Secondary structure										S	S	T	T										S	T	T		.						T	T	T	T							.	.	.	T	T	S									S	T	T										T
Template Predicted Secondary structure																											.																.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions