Job Description P52697 Confidence 99.88% Date Thu Jan 5 12:06:01 GMT 2012 Rank 19 Aligned Residues 313 % Identity 14% Template c2j57J_ PDB info PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: x-ray reduced paraccocus denitrificans methylamine2 dehydrogenase n-quinol in complex with amicyanin. Resolution 2.25 Å

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		3	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.										.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																																															.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																																															.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	V	Y	I	A	S	.	.	.	.	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	.	.	.	.	.	.	.	.	.	P	E	F	R	V	L	A	Y	R	I	A	P	D	D
Query Conservation									.	.	.	.																																															.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.															.	.	.													.																	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.													.
Template Sequence		R	R	V	Y	V	N	D	P	A	H	F	A	A	V	T	Q	Q	F	V	I	D	G	E	A	G	.	.	.	R	V	I	G	M	I	D	G	G	F	L	P	.	N	P	V	V	A	D	D	G	S	F	I	A	H	A	S	T	V	F	S	R	I	A	R	G	E	R	T	D	Y	V	E	V	F	D	P	V	T	L	L
Template Known Secondary structure		T								G	G	G		S	S								T	T	T	T	.	.	.										S	S		.						T	T	S	S												T	T													T	T	T
Template Predicted Secondary structure																											.	.	.													.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																												.																														.	.	.	.	.
Query SS confidence								.	.	.	.																												.																														.	.	.	.	.
Query Sequence		G	A	L	T	F	A	.	.	.	.	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	.	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	.	.	.	.	.	A	N	I	S	P	D	N	R
Query Conservation								.	.	.	.																												.																														.	.	.	.	.
Alig confidence								.	.	.	.																												.																														.	.	.	.	.
Template Conservation
Template Sequence		P	T	A	D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	P	W	M	T	S	L	T	P	D	G	K	T	L	L	F	Y	Q	F	S	P	A	P	A	V	G	V	V	D	L	E	G	K	A	F	K	R	M	L	D	V	P	D	C	Y	H	I	F	P	T	A	P	D	T	F	F	M	H	C	R	D	G	S
Template Known Secondary structure									T	T							S			G	G	G					T	T	S									S	S	S								T	T	T	T										S									T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		L	A	K	V	A	F	G	T	E	G	T	P	E	I	T	H	T	E	V	F	H	.	P	E	D	E	F	L	I	N	H	P	A	Y	S	Q	K	A	G	R	L	V	W	P	T	Y	T	G	K	I	H	Q	I	D	L	S	S	G	D	A	K	F	L	P	A	V	E	A	L	T	E	A	E	R	A	D	G	W	R	P
Template Known Secondary structure									S	S	S	S										S	.		T	T	S		B		S						T	T	T	T						B	T	T	S								T	T	S	S									S	S							T	T
Template Predicted Secondary structure																							.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	.	Y	L	I	A	A	G	Q	K	S	H	H
Query Conservation																																																																						.
Alig confidence																																																					.	.	.	.														.
Template Conservation																																																					.	.	.	.
Template Sequence		G	G	W	Q	Q	V	A	Y	H	R	A	L	D	R	I	Y	L	L	V	D	Q	R	D	E	W	R	H	K	T	A	S	R	F	V	V	V	L	D	A	K	T	G	E	R	L	A	K	F	E	M	G	.	.	.	.	H	E	I	D	S	I	N	V	S	Q	D	E	K	P	L	L	Y	A	L	S	T	G	D	K	T
Template Known Secondary structure			S	S	S						T	T	T	T											T	T		T	T	S										T	T	T											.	.	.	.											S	S	S								T	T	T	T
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	.	V	G	Q	G	P	M	W	V	V	V
Query Conservation																						.
Alig confidence						.	.						.	.								.
Template Conservation						.	.						.	.
Template Sequence		L	Y	I	H	.	.	D	A	E	S	G	.	.	E	E	L	R	S	V	N	Q	L	G	H	G	P	Q	V	I	T	T
Template Known Secondary structure						.	.		T	T	T		.	.											S	S
Template Predicted Secondary structure						.	.						.	.
Template SS confidence
		356	.	.	.			360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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