Job Description P52697 Confidence 99.29% Date Thu Jan 5 12:06:01 GMT 2012 Rank 116 Aligned Residues 308 % Identity 12% Template c2iwkB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: inhibitor-bound form of nitrous oxide reductase from2 achromobacter cycloclastes at 1.7 angstrom resolution Resolution 1.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																				.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		R	Y	L	F	M	N	D	K	A	N	T	R	V	A	R	V	R	C	D	V	.	M	K	T	D	A	I	L	E	I	P	N	A	K	G	I	H	G	M	R	P	Q	K	W	P	R	S	N	Y	V	F	C	N	G	E	D	E	A	P	L	V	N	D	G	S	T	M	T	D	V	A	T	Y	V	N	I	F	T	A	V
Template Known Secondary structure									T	T	T	T							T	T	T	.	T									S	S			S									S	S	B		S								S		B		S	S		S	S	S	S	T	T		G	G	G		B
Template Predicted Secondary structure																						.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V
Query Conservation
Alig confidence							.	.	.	.																																																																	.	.	.	.	.
Template Conservation							.	.	.	.																																																																	.	.	.	.	.
Template Sequence		D	A	D	K	W	.	.	.	.	E	V	A	W	Q	V	K	V	S	G	N	L	D	N	C	D	A	D	Y	E	G	K	W	A	F	S	T	S	Y	N	S	E	M	G	M	T	L	E	E	M	T	K	S	E	M	D	H	V	V	V	F	N	I	A	E	I	E	K	A	I	K	A	G	Q	.	.	.	.	.	Y	E
Template Known Secondary structure			T	T	T	T	.	.	.	.									S	S									S	S	S	S							S		T	T			S	S					T		S	S																			T		.	.	.	.	.	S
Template Predicted Secondary structure							.	.	.	.																																																																	.	.	.	.	.
Template SS confidence
		186	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	.	E	C	V	Q	T	L	D	M	M	P
Query Conservation																																																																							.
Alig confidence																						.	.	.	.	.	.	.																																											.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		E	I	N	G	V	K	V	V	D	G	R	K	E	A	K	S	L	F	T	R	.	.	.	.	.	.	.	Y	I	P	I	A	N	N	P	H	G	C	N	M	A	P	D	R	K	H	L	C	V	A	G	K	L	S	P	T	V	T	V	L	D	V	T	K	F	D	A	L	F	Y	D	N	A	E	P	R	S	A	V	V
Template Known Secondary structure				T	T								G	G	G	T		S	S			.	.	.	.	.	.	.					S	S	S								T	T	S	S							T	T	S	S	B						G	G	G							S				G	G	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.								.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.							.	.	.	.	.	.	.	290
Predicted Secondary structure																																									.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	.	.	.	.	.	.	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	.	.	.	.	.	.	D	H	S	G	K	Y	L	I
Query Conservation																																									.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																					.																				.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																					.
Template Sequence		A	E	P	E	L	G	L	G	P	L	H	T	A	F	D	G	R	G	N	.	A	Y	T	S	L	F	L	D	S	Q	V	V	K	W	N	I	D	E	A	I	R	A	Y	A	G	E	K	I	N	P	I	K	D	K	L	D	V	Q	Y	Q	P	G	H	L	K	T	V	M	G	E	T	L	D	A	A	N	D	W	L	V
Template Known Secondary structure					B			S									T	T	S		.						T	T	T	T																T													S	S								T	T	T	T	S	T	T			S	S
Template Predicted Secondary structure																					.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		291	.	.	.	.	.													.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		A	A	G	Q	K	S	.	.	.	.	.	.	.	.	.	.	.	.	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P	M	.	W	V	V	V	N	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.												.	.																.
Template Conservation																															.	.
Template Sequence		C	L	C	K	F	S	K	D	R	F	L	N	V	G	P	L	K	P	E	N	D	Q	L	I	D	I	S	G	D	.	.	K	M	V	L	V	H	D	G	P	T	F	A	E	P	H	D	A	I	A	V	S	P
Template Known Secondary structure					S			G	G	G	S					S	S											S	S	S	.	.	S										S	S										G
Template Predicted Secondary structure																															.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.			.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions