Job Description P52697 Confidence 99.16% Date Thu Jan 5 12:06:01 GMT 2012 Rank 127 Aligned Residues 281 % Identity 10% Template c2gopB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:trilobed protease; PDBTitle: the beta-propeller domain of the trilobed protease from pyrococcus2 furiosus reveals an open velcro topology Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																																									.	.
Query SS confidence														.	.	.	.																																									.	.
Query Sequence		K	Q	T	V	Y	I	A	S	P	E	S	Q	.	.	.	.	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	.	.	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A
Query Conservation														.	.	.	.																																									.	.
Alig confidence														.	.	.	.																	.	.	.	.	.	.	.																		.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		E	L	V	A	Y	V	L	T	K	A	D	N	K	Y	E	N	T	I	V	I	E	N	L	K	N	N	A	R	R	F	I	E	.	.	.	.	.	.	.	N	A	T	M	P	R	I	S	P	D	G	K	K	I	A	F	M	R	A	N	E	E	K	K	V	S	E	I	W	V	A	D	L	E	T	L	S	S	K	K	I
Template Known Secondary structure		T												S										T	T	T								.	.	.	.	.	.	.	T								T	T	S	S									T	T	T	T									T	T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T
Query Conservation
Alig confidence					.	.	.																																												.																									.	.	.	.	.
Template Conservation					.	.	.																																												.																									.	.	.	.	.
Template Sequence		L	E	A	.	.	.	K	N	I	R	S	L	E	W	N	E	D	S	R	K	L	L	I	V	G	F	K	D	G	E	K	T	T	F	W	I	F	D	T	E	S	E	E	V	I	E	E	F	E	.	K	P	R	F	S	S	G	I	W	H	R	D	K	I	V	V	N	V	P	H	R	E	I	I	.	.	.	.	.	P
Template Known Secondary structure					.	.	.	S									T	T	S	S																				T	T	T	T								.			T	T							T	T											S	S	.	.	.	.	.
Template Predicted Secondary structure					.	.	.																																												.																									.	.	.	.	.
Template SS confidence
		101	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		Q	Y	F	K	F	W	D	I	Y	I	W	E	D	G	K	E	E	K	M	F	E	K	V	S	F	Y	A	V	D	S	D	G	E	R	I	L	L	Y	G	K	P	E	K	.	.	.	.	.	.	.	K	Y	M	S	E	H	N	K	L	Y	I	Y	D	G	K	E	V	M	G	I	L	D	E	V	D	R	G	V	G	Q
Template Known Secondary structure			S	S										T	T										S								S	S	S								T	T	.	.	.	.	.	.	.		T	T		S								S	S	S					S	S	T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.								.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H
Query Conservation
Alig confidence																										.	.									.	.	.	.	.
Template Conservation																										.	.									.	.	.	.	.
Template Sequence		A	K	I	K	D	G	K	V	Y	F	T	L	F	E	E	G	S	V	N	L	Y	I	W	D	.	.	G	E	I	K	P	I	A	K	.	.	.	.	.	G	R	H	W	I	M	G	F	D	V	D	E	I	V	V	Y	L	K	E	T	A	T	R	L	R	E	L	F	T	W	D	G	E	E	K	Q	L	T
Template Known Secondary structure						T	T									T	T								S	.	.	S	S							.	.	.	.	.	S	S	S								S	S	S								S	S	S								S	S	S
Template Predicted Secondary structure																										.	.									.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions