Job Description P52697 Confidence 99.67% Date Thu Jan 5 12:06:01 GMT 2012 Rank 70 Aligned Residues 270 % Identity 10% Template c2gnqA_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd-repeat protein 5; PDBTitle: structure of wdr5 Resolution 1.80 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S
Query Conservation
Alig confidence																									.																		.	.	.	.
Template Conservation																									.																		.	.	.	.
Template Sequence		K	F	T	L	A	G	H	T	K	A	V	S	S	V	K	F	S	P	N	G	E	W	L	.	A	S	S	S	A	D	K	L	I	K	I	W	G	A	Y	D	G	.	.	.	.	K	F	E	K	T	I	S	G	H	K	L	G	I	S	D	V	A	W	S	S	D	S	N	L	L	V	S	A	S	D	D	K	T	L	K
Template Known Secondary structure									S	S									T	T	S	S			.					T	T	S							T	T	T		.	.	.	.										S	S									T	T	S	S							T	T	S
Template Predicted Secondary structure																									.																		.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	W	D	V	S	S	G	K	C	L	K	T	L	K	G	H	S	N	Y	V	F	C	C	N	F	N	P	Q	S	N	L	I	V	S	G	S	F	D	E	S	V	R	I	W	D	V	K	T	G	K	C	L	K	T	L	P	A	H	S	D	P	V	S	A	V	H	F	N	R	D	G	S	L	I	V	S	S	S	Y	D
Template Known Secondary structure					T	T	T											S	S									S	S	S	S							T	T	S							T	T	T											S	S									T	T	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240																										.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	C	R	I	W	D	T	A	S	G	Q	C	L	K	T	L	I	D	D	D	N	P	P	V	S	F	V	K	F	S	P	N	G	K	Y	I	L	A	A	T	L	D	N	T	L	K	L	W	D	Y	S	K	G	K	C	L	K	T	Y	T	G	H	K	N	E	K	Y	C	I	F	A	N	F	S	V	T	G	G	K
Template Known Secondary structure		S							T	T	T										S	S											T	T	S	S							T	T	T							T	T	T	T								S	S			S	S	S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	.	K	S	H	H	I	S	V	Y	E	I	V
Query Conservation																																																						.
Alig confidence																															.	.	.																					.
Template Conservation																															.	.	.
Template Sequence		W	I	V	S	G	S	E	D	N	L	V	Y	I	W	N	L	Q	T	K	E	I	V	Q	K	L	Q	G	H	T	.	.	.	D	V	V	I	S	T	A	C	H	P	T	E	N	I	I	A	S	A	A	L	E	N	D	K	T	I	K	L	W	K	S	D
Template Known Secondary structure								T	T	S							T	T	T											S	.	.	.	S									S	S	S	S								T	T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions