Job Description P52697 Confidence 98.44% Date Thu Jan 5 12:06:01 GMT 2012 Rank 149 Aligned Residues 309 % Identity 12% Template c2eepA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl aminopeptidase iv, putative; PDBTitle: prolyl tripeptidyl aminopeptidase complexed with an inhibitor Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	.	.
Query Conservation																																																																																.	.
Alig confidence																				.	.	.																													.	.																												.	.
Template Conservation																				.	.	.																													.	.
Template Sequence		L	V	V	L	F	T	Q	G	G	L	V	G	F	D	M	L	A	R	.	.	.	K	V	T	Y	L	F	D	T	N	E	E	T	A	S	L	D	F	S	P	V	G	D	R	V	A	Y	V	R	.	.	N	H	N	L	Y	I	A	R	G	G	K	L	G	E	G	M	S	R	A	I	A	V	T	I	D	G	T	E	T
Template Known Secondary structure								T	T							T	T	T	T	.	.	.									T	T			T	T					T	T	S	S							.	.	T	T								B		T	T	S								S		S			B	T	T
Template Predicted Secondary structure																				.	.	.																													.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
																84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																																	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	V	T	R	L	E	D	G	L	P	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	Y	G	Q	A	V	H	Q	R	E	F	G	I	E	K	G	T	F	W	S	P	K	G	S	C	L	A	F	Y	R	M	D	Q	S	M	V	K	P	T	P	I	V	D	Y	H	P	L	E	A	E	S	K	P	L	Y	Y	P	M	A	G	T	P	S	H	H	V	T	V	G	I	Y	H	L	A	T	G	K	T	V
Template Known Secondary structure					S	S			G	G	G		T	T				S					T	T	S	S										T	T	S										S	S	S										B	T	T	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	.	.	.	.	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.
Template Conservation
Template Sequence		Y	L	Q	T	G	E	P	K	E	K	F	L	T	N	L	S	W	S	P	D	E	N	I	L	Y	V	A	E	V	N	R	A	Q	N	E	C	K	V	N	A	Y	D	A	E	T	G	R	F	V	R	T	L	F	V	E	T	D	K	H	Y	V	E	P	L	H	P	L	T	F	L	P	G	S	N	N	Q	F	I	W	Q
Template Known Secondary structure							S		T	T										T	T	S	S									T	T	S										T	T	T													S	S						S						T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	.	.	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q
Query Conservation																																																												.	.
Alig confidence																												.	.	.	.	.	.	.	.																									.	.																.	.	.
Template Conservation																												.	.	.	.	.	.	.	.																																										.	.	.
Template Sequence		S	R	R	D	G	W	N	H	L	Y	L	Y	D	T	T	G	R	L	I	R	Q	V	T	K	G	E	.	.	.	.	.	.	.	.	W	E	V	T	N	F	A	G	F	D	P	K	G	T	R	L	Y	F	E	S	T	E	A	S	P	L	E	R	H	F	Y	C	I	D	I	K	G	G	K	T	K	.	.	.	D	L
Template Known Secondary structure				T	T	S	S								T	T	S							S		S	S	.	.	.	.	.	.	.	.	S										T	T	S								S	S	S		T	T		B							T	T						.	.	.		S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																																										.	.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380									.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.				.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	.	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P	M	W	V	V	V	N	A
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		T	P	E	S	G	M	H	R	T	Q	L	S	P	D	G	S	A	I	I	D	I	F	Q	S	P	T	V	P	R	K	V	T	V	T	N	I	G	K	G	S	H	T	L	L	E	A	K	N	A	M	P	E	I	R	T	G	T	I	M	A
Template Known Secondary structure				S	S	S								S	S	S	S									S	S		S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions