Job Description P52697 Confidence 98.32% Date Thu Jan 5 12:06:01 GMT 2012 Rank 150 Aligned Residues 267 % Identity 9% Template c2ecfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia Resolution 2.80 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.																																.	.	.
Query SS confidence																					.	.	.																																.	.	.
Query Sequence		P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	.	.	.	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	.	.	.	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V
Query Conservation																					.	.	.																																.	.	.
Alig confidence																					.	.	.																																.	.	.																	.	.
Template Conservation																																																																										.	.
Template Sequence		G	P	T	L	M	K	P	K	V	A	P	D	G	S	R	V	T	F	L	R	G	K	D	S	D	R	N	Q	L	D	L	W	S	Y	D	I	G	S	G	Q	T	R	L	L	V	D	S	K	V	V	L	A	M	T	G	I	V	D	Y	Q	W	S	P	D	A	Q	R	L	L	F	P	L	.	.	G	G	E	L	Y	L
Template Known Secondary structure												T	T	S	S									S	S		T	T									T	T	T									G	G	G	T						S							T	T	S	S							.	.	T	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		Y	D	L	K	Q	E	G	K	A	A	V	R	Q	L	T	H	G	E	G	F	A	T	D	A	K	L	S	P	K	G	G	F	V	S	F	I	R	G	R	N	.	.	L	W	V	I	D	L	A	S	G	R	Q	M	Q	L	T	A	D	G	S	T	T	I	G	N	G	I	A	E	F	V	A	D	E	E	M	D	R	H
Template Known Secondary structure				S	S	S		S	T	T	S			B				S	S	S									T	T	S	S							T	T		.	.						T	T	T	T											S	S				S										S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	Y	W	W	A	P	D	D	S	A	I	A	Y	A	R	I	D	E	S	P	V	P	V	Q	K	R	Y	E	V	Y	A	D	R	.	.	.	.	.	.	.	.	.	.	.	T	D	V	I	E	Q	R	Y	P	A	A	G	D	A	N	V	Q	V	K	L	G	V	I	S	P	A	E	Q	A	Q	T	Q	W	I	D
Template Known Secondary structure			S					T	T	S	S										T	T	S										S	S		.	.	.	.	.	.	.	.	.	.	.										B	T	T	S												S	S	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.												.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	.	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		L	G	K	E	Q	D	I	Y	L	A	R	V	N	W	R	D	P	Q	H	L	S	F	Q	R	Q	S	R	D	Q	K	K	L	D	L	V	E	V	T	L	A	S	N	Q	Q	R	V	L	A	H
Template Known Secondary structure				S		S	S											T	T									T	T	S	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions