Job Description P52697 Confidence 99.12% Date Thu Jan 5 12:06:01 GMT 2012 Rank 128 Aligned Residues 319 % Identity 15% Template c2eceA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:462aa long hypothetical selenium-binding protein; PDBTitle: x-ray structure of hypothetical selenium-binding protein2 from sulfolobus tokodaii, st0059 Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.								.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.									.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.									.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	T	V	Y	I	A	S	P	E	S	Q	Q	.	.	.	.	.	.	.	I	H	V	W	N	L	N	H	.	.	.	.	.	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	D	K	R	Y	L	Y	V	G	V	R	P
Query Conservation															.	.	.	.	.	.	.									.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.									.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	L	A	Y	V	A	C	L	Y	T	G	T	G	I	N	R	A	D	F	I	A	V	V	D	V	N	P	K	S	E	T	Y	S	K	I	V	H	K	V	E	L	P	Y	I	N	D	E	L	H	H	F	G	W	N	A	C	S	S	A	L	C	P	N	G	K	P	N	I	E	R	R	F	L	I	V	P	G	L	R
Template Known Secondary structure			S									T	T	T	T														T	T	S	T	T	T	T	S								S	S	S				B						S			G	G	G	G	S	T	T			T	T			S							B	T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.									80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																										.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.																										.	.	.	.
Query Sequence		E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	.	.	.	.	.	.	.	.	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	.	.	.	.	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E
Query Conservation																									.	.	.	.	.	.	.	.																										.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		S	S	R	I	Y	I	I	D	T	K	P	N	P	R	E	P	K	I	I	K	V	I	E	P	E	E	V	K	K	V	S	G	Y	S	R	L	H	T	V	H	C	G	P	D	A	I	Y	I	S	A	L	G	N	E	E	G	E	G	P	G	G	I	L	M	L	D	H	Y	S	F	E	P	L	G	K	W	E	I	D	R
Template Known Secondary structure		T										S		T	T	S																												S	S										T	T	S		S									T	T	T									S	B
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.										.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	.	.	.	.	.	.	.	.	.	A	L	K	.	.	.	.	.	.	.	.	.	.	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P
Query Conservation																						.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																																																																		.	.
Template Sequence		G	D	Q	Y	L	A	Y	D	F	W	W	N	L	P	N	E	V	L	V	S	S	E	W	A	V	P	N	T	I	E	D	G	L	K	L	E	H	L	K	D	R	Y	G	N	R	I	H	F	W	D	L	R	K	R	K	R	I	H	S	L	T	L	G	E	.	.	E	N	R	M	A	L	E	L	R	P	L	H	D	P
Template Known Secondary structure		T	T											T	T	T	T						B								T	T				T	T	T					S									T	T	T	T								S		T	.	.	T											S	S	T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.
		186	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.											.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure												.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	Q	Y	A	Y	C	V	N	E	.	.	.	.	.	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	.	.	.	.	.	.	.	.	.	.	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A
Query Conservation												.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	L	M	G	F	I	N	M	V	V	S	L	K	D	L	S	S	S	I	W	L	W	F	Y	E	D	G	K	W	N	A	E	K	V	I	E	I	P	A	E	P	L	E	G	N	L	P	E	I	L	K	P	F	K	A	V	P	P	L	V	T	D	I	D	I	S	L	D	D	K	F	L	Y	L	S	L	W	G	I
Template Known Secondary structure		T												T	T	T												T	T																	S	S			G	G	G	G	G	G	T													T	T	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.															.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.														.	.	.	.	300	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	H	I	S	V	Y	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	V	R	Q	Y	D	I	S	N	P	F	K	P	V	L	T	G	K	V	K	L	G	G	I	F	H	R	A	D	H	P	A	G	H	K	L	T	G	A	P	Q	M	L	E	I	S	R	D	G	R	R	V	Y	V	T	N	S	L	Y	S	T	W	D	N	Q	F	Y	P	E	G	L	K	G	W	M	V	K	L	N
Template Known Secondary structure		T								S	S	T	T	S										B	T	T	T	T		B			T	T	S					S									T	T	S	S																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		A	N	P	.	S	G	G	L	E	I	D	K	E	F	F	V	D	F	G	E
Template Known Secondary structure				T	.	T	S													T	T
Template Predicted Secondary structure					.
Template SS confidence
		423	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions