Phyre 2 alignment of P52697 with c2aq5A

Job Description P52697
Confidence 99.79% Date Thu Jan 5 12:06:01 GMT 2012

Rank 35 Aligned Residues 269

% Identity 15% Template c2aq5A_

PDB info PDB header:structural protein Chain: A: PDB Molecule:coronin-1a; PDBTitle: crystal structure of murine coronin-1

Resolution 1.75 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.
Predicted Secondary structure																													.																																															.	.	.
Query SS confidence																													.																																															.	.	.
Query Sequence	K	Q	T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	.	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	.	.	.	A	E
Query Conservation																													.																																															.	.	.
Alig confidence																													.																						.																									.	.	.
Template Conservation																																																			.
Template Sequence	K	F	M	A	L	I	E	A	S	G	G	G	A	F	L	V	L	P	L	G	K	T	G	R	V	D	K	N	V	P	L	V	G	H	T	A	P	V	L	D	I	A	W	P	H	N	D	N	V	I	.	A	S	G	S	E	D	C	T	V	M	V	W	E	I	P	D	G	G	L	V	L	P	L	R	E	P	V	I	T
Template Known Secondary structure	S								S	S	S								T	T							T	T							S	S											T	T			.					T	T	S									T	T			S	S				S		S
Template Predicted Secondary structure																																																			.
Template SS confidence
	45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

	78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S
Query Conservation
Alig confidence																																																																					.
Template Conservation																																																																					.
Template Sequence	L	E	G	H	T	K	R	V	G	I	V	A	W	H	P	T	A	Q	N	V	L	L	S	A	G	D	N	V	I	L	V	W	D	V	G	T	G	A	A	V	L	T	L	G	P	D	V	H	P	D	T	I	Y	S	V	D	W	S	R	D	G	A	L	I	C	T	S	C	.	R	D	K	R	V	R	V	I	E	P	R
Template Known Secondary structure					S	S									S	S	B	T	T															T	T	T	T								T	T	T			S									T	T	S	S							.	T	T	S							T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
	127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.

	158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	K	G	T	V	V	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	R	P	H	E	G	T	R	P	V	H	A	V	F	V
Template Known Secondary structure	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S		S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	207	.	.	210	.	.	.																																																										.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

	238	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence	P	D	G	R	H	L	Y	A	C	.	.	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G
Query Conservation										.	.
Alig confidence										.	.																					.
Template Conservation																																.
Template Sequence	S	E	G	K	I	L	T	T	G	F	S	R	M	S	E	R	Q	V	A	L	W	D	T	K	H	L	E	E	P	L	S	.	L	Q	E	L	D	T	S	S	G	V	L	L	P	F	F	D	P	D	T	N	I	V	Y	L	C	G	K	G	D	S	S	I	R	Y	F	E	I	T	S	E	A	P	F	L	H	Y	L	S
Template Known Secondary structure	S	T	T									T	T										T	T	B		S	S		S		.								S	S								T	T	T	T							T	T		S									S	S	T	T
Template Predicted Secondary structure																																.
Template SS confidence
	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

	316	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence	R	Y	A	V	G	Q	G	P	M	W	V	V	V	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence	M	F	S	S	K	E	S	Q	R	G	M	G	Y	M	P
Template Known Secondary structure					S	S			S
Template Predicted Secondary structure
Template SS confidence
	309	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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