Job Description P52697 Confidence 98.24% Date Thu Jan 5 12:06:01 GMT 2012 Rank 151 Aligned Residues 274 % Identity 12% Template c1yr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl oligopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl endopeptidases: role2 of inter-domain dynamics in catalysis and specificity Resolution 1.80 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.																																									.	.	.	.
Query SS confidence																									.	.	.	.																																									.	.	.	.
Query Sequence		Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	.	.	.	.	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	.	.	.	.	S	Y	N	A	G	N	V	S	V
Query Conservation																									.	.	.	.																																									.	.	.	.
Alig confidence																									.	.	.	.										.	.	.	.																												.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		A	L	D	A	W	A	A	S	D	D	G	R	L	L	A	Y	S	V	Q	D	G	G	S	D	W	R	T	V	K	F	V	G	V	A	D	G	.	.	.	.	K	P	L	A	D	E	L	K	W	V	K	F	S	G	L	A	W	L	G	N	D	A	L	L	Y	S	R	F	A	E	P	L	N	Y	N	Q	T	V	W	L
Template Known Secondary structure										T	T	S	S									T	T		S									T	T	T		.	.	.	.												S						S	T	T	S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	.	.	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		H	R	L	G	T	P	Q	S	A	D	Q	P	V	F	A	T	P	E	L	P	K	R	G	H	G	A	S	V	S	S	D	G	R	W	V	V	I	T	S	S	E	G	T	D	P	V	N	T	V	H	V	A	R	V	T	N	G	K	I	G	P	V	T	A	L	I	P	D	L	K	A	Q	W	D	F	V	D	G	V	G
Template Known Secondary structure				T	T	S		G	G	G								T	T		T	T									T	T	S										T	T		S											T	T											S	S	S	S									T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		D	Q	L	W	F	V	S	G	D	G	A	P	L	K	K	I	V	R	V	D	L	S	G	S	T	P	R	F	D	T	V	V	P	E	S	K	D	N	L	.	.	.	.	.	.	.	.	E	S	V	G	I	A	G	N	R	L	F	A	S	Y	I	H	D	A	K	S	Q	V	L	A	F	D	L	D	G	K	P	A	G
Template Known Secondary structure		T								T	T		T	T									S	S	S	S											S	S			.	.	.	.	.	.	.	.							B	T									T	T									T	T	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.									.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	.	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	V	G	Q	G	P
Query Conservation																																		.
Alig confidence									.																									.
Template Conservation									.
Template Sequence		A	V	S	L	P	G	I	.	G	S	A	S	G	L	S	G	R	P	G	D	R	H	A	Y	L	S	F	S	S	F	T	Q	P	A	T	V	L	A	L	D	P	A	T	A	K	T	T	P	W	E	P	V	H	L	T	F	D	P
Template Known Secondary structure				B		S	S	S	.										B	T		S									T	T										T	T	T	T						S					S	S		G
Template Predicted Secondary structure									.
Template SS confidence
		400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions